v0.3.3

Changelog

• 43eae4d build(deps): bump the all-modules group with 7 updates (#657)
• 26d0706 Bump module versions
• 5d6f1c0 Update tooling to GO 1.25
• 4a83035 Fix deprected flag in testing
• 41a7a6d build(deps): bump the all-modules group with 7 updates
• 9b1ea0f feat(htsget): add support for format flag (#656)
• a392584 Merge branch 'main' into feature/htsget_format_arg
• 3e7de1a build(deps): bump the all-modules group across 1 directory with 6 updates (#653)
• 99c882a feat(htsget): fix lint issues, add #nosec in unit tests where xss is safe, add excplit ignore of return from fmt.Println
• 5a556da feat(htsget): add support for format flag to propagate to htsget, also update htsget error handling to return error message from htsget-rs if populated if http code is 400 or 404
• dbd1450 build(deps): bump the all-modules group across 1 directory with 6 updates

v0.3.2

Changelog

• 337ce9f build(deps): bump goreleaser/goreleaser-action from 6.4.0 to 7.0.0 in the all-modules group (#652)
• c2b5529 build(deps): bump filippo.io/edwards25519 from 1.1.0 to 1.1.1 (#651)
• 4c53d7a build(deps): bump goreleaser/goreleaser-action in the all-modules group
• d3be4d6 build(deps): bump filippo.io/edwards25519 from 1.1.0 to 1.1.1
• e90d3e2 Bug fix for recursive and dataset download (#649)
• 43e85b9 Add #nosec G703 comments
• 089fdd2 Add #nosec G704 comments
• 8583b7f Add #nosec G705 comments
• 200fe55 Add #nosec G117 comments
• dd57c1c Modify file path in setup integration test
• de67326 Fix recursive file path matching
• e45ed8a Remove entries from mock data in download tests
• 08bfc1a Update File struct in download
• e5817ad Update integration tests (download)
• 61ee533 Correct dataset ID usage in file download URLs
• d9ca40b [download] Improving download user experience (#643)
• ad916b9 feat: ignore linting error for package name conflict
• f48366e refactor(download): remove dead code
• 565bb40 feat(download): add unit test to ensure that the cleanup works as expected
• 2901425 refactor: delete existing file before downloading
• a0b2fc0 feat: add back downloading file message
• d4b8c29 feat: make file renaming windows compatible
• 8801c30 refactor: avoid nested if else
• 98467af feat: improve progress bar to solve slow streaming download
• 3774500 refactor: apply reviewers comments with syntax
• 30160e0 feat: improve download progress bar
• 8446075 feat: use streaming for getBody
• 4b2f5e3 feat: name the download file as .part before completion
• a73de81 fix: other unit tests for download
• b95ae3c feat: remove unit tests for downloading without pubkey
• 6620584 feat: better filePath handling logic in downloadFile too
• a09e5f7 feat: apply reviewers comments
• 9c0e643 fix: skip download with --continue should be fast
• d0050f2 feature/ Add encryptionScheme=C4GH when calling htsget-rs (#632)
• 8d79684 build(deps): bump the all-modules group with 2 updates (#644)
• 7da55f8 feat(htsget): use Htsget-Context-Public-Key instead of Client-Public-Key when calling htsget, but keep Client-Public-Key when calling sda-download
• 227ddbd feat(htsget): fix unit test mock htsget server
• a19220d feat(htsget): add encryptionScheme=C4GH when calling htsget-rs
• 40e14f9 build(deps): bump the all-modules group with 2 updates

v0.3.1

What's Changed

• build(deps): bump the all-modules group with 5 updates by @dependabot[bot] in #616
• [refactoring] Add spf13/cobra library to handle argument parsing by @zeidlitz in #602
• build(deps): bump the all-modules group with 5 updates by @dependabot[bot] in #617
• Fix display of upload file location by @viklund in #619
• build(deps): bump the all-modules group with 6 updates by @dependabot[bot] in #621
• build(deps): bump golangci/golangci-lint-action from 8.0.0 to 9.0.0 in the all-modules group by @dependabot[bot] in #620
• build(deps): bump the all-modules group with 5 updates by @dependabot[bot] in #624
• build(deps): bump golang.org/x/crypto from 0.44.0 to 0.45.0 by @dependabot[bot] in #625
• build(deps): bump the all-modules group with 2 updates by @dependabot[bot] in #626
• build(deps): bump the all-modules group across 1 directory with 2 updates by @dependabot[bot] in #633
• build(deps): bump the all-modules group across 1 directory with 8 updates by @dependabot[bot] in #634
• build(deps): bump the all-modules group with 5 updates by @dependabot[bot] in #635
• build(deps): bump the all-modules group with 6 updates by @dependabot[bot] in #636
• build(deps): bump golang.org/x/net from 0.48.0 to 0.49.0 in the all-modules group by @dependabot[bot] in #638
• download returns useful message when HTTP status code is 412 by @nanjiangshu in #637
• build(deps): bump the all-modules group with 3 updates by @dependabot[bot] in #640

Full Changelog: v0.3.0...v0.3.1

v0.3.0

Changelog

• 69e93b3 Persistent session cache (#610)
• f411e7c Remove documentation about downloading with fileID (#606)
• 7e1bab2 Revert "Downgrade the AWS library version"

v0.2.1

Changelog

• Downgrade the AWS library version (#598)

This release fixes a signature error when uploads are made against an older version of Ceph (<18.2.5).

v0.2.0

What's Changed

• fix: report when subcommand is missing by @MalinAhlberg in #534
• More user friendly version message by @aaperis in #535
• better error message for config flag by @MalinAhlberg in #536
• Feature/download resume dataset by @aaperis in #542
• [docs] update instruction for downloading files by @nanjiangshu in #548
• [encrypt] adding progress bar to file encryption by @zeidlitz in #552
• Feature/streaming encryption by @jbygdell in #555
• Feature/unify log output (#455) by @KarlG-nbis in #559
• hotfix for continue flag parsing by @pahatz in #565
• Feature/migrate to aws sdk v2 (#479) by @KarlG-nbis in #560

Full Changelog: v0.1.6...v0.2.0

v0.1.6

What's Changed

• Make release changelog to work correctly by @aaperis in #519
• Bump golangci/golangci-lint-action from 6.5.0 to 6.5.1 by @dependabot in #521
• Bump golangci/golangci-lint-action from 6.5.1 to 6.5.2 by @dependabot in #526
• Add Ceph backend to the docker compose setup by @jbygdell in #523
• fix: show current version by @MalinAhlberg in #528
• add paging using file marker by @aaperis in #522
• fix: do not print host_base to stdout by @MalinAhlberg in #530

Full Changelog: v0.1.5...v0.1.6

v0.1.5

Changelog

• 8557f5c Update to go 1.24 (#517)
• 6ca004a Bump github.com/vbauerster/mpb/v8 from 8.9.2 to 8.9.3 (#515)
• a753139 Bump github.com/neicnordic/crypt4gh from 1.13.0 to 1.14.0 (#514)
• 329b6bd [list] use pagination to list s3 objects (#513)
• 867622f Show only status code from s3's seralization error message (#512)
• bebb0ef display host_base (#511)
• 4b12245 Feature/resume upload from breakpoint (#510)

v0.1.4

What's Changed

• Update documentation for list #450
• Public key file permissions set to full read access #452
• Decrypt multiple files without aborting #451
• Clean up encrypted files after decryption #454
• Check for new releases #463
• Don't write the public key to disk #464
• Config file provided before command #458
• More human friendly token expiry date messages #498
• Update help info and documentation #487
• Remove usage of s3-encrypted #506

Full Changelog: v0.1.3...v0.1.4

v0.1.3

Changelog

• Upload files by supplying the token as an ENV or on the command line (#447)
• List datasets more info (#444)
• Feature/list dataset show more info (#443)
• Deprecate download, replace with sda-download (#427)
• Extend invalid characters for checking (#428)
• Enhance/download from file (#420)
• Bug/progress bar (#418)
• Download fileid (#417)
• List datasets (#415)
• Recursive download (#413)
• Download dataset (#408)
• Enable downloading encrypted file from sda-download API (#406)
• Download files via htsget (#371)
• Feature/sda download (#392)
• Help returns exit 0 code (#389)
• update to go 1.22 (#386)