Topic gas functors multi species #5
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- use TBG_ environent variables for -s and -t - update hypnos modules to recent libSplash/HDF5 und cmake 3.0.1
- intel with `dev` currently jamming on boost::mpl errors (boost 1.56+ support will be in beta-rc7) - gcc works with `beta-rc6` and `dev`
Radiation causes a compile error since it is not consequently disabled on missing hdf5.
…diationNoHDF5 Fix Radiation: No HDF5 great job 👍
…updateProfilesTbg Taurus/Hypnos: Update Examples with new TBG Hints :+1:
- adios 1.7.0 (already some month in) - mallocMC 2.0.1crp (today) - only test a specific commit, cronjob will request new work
The empty example ensures that the reference files in src/picongpu/include/simulation_defines are all in valid syntax.
…Boards SoC-like boards share the same memory for the device and host. Since we still do double buffering, we should only reserve *half* of the available "device" memory for particles.
Use movingWindowCheck as a hook just at the start of a fresh time step, but before the plugins are called.
- forward LD_LIBRARY_PATH in mpirun, too - increases convenience for the user, should not cause side-effects
…updateCompileSuiteModules CompileSuite: Update Modules and Do not Loop
…addEmptyExample Add an Empty Example
…dateHypnosMore Hypnos: grcat, fermi, mails
…pluginCntPartRestart Add Restart For CountParticles, EnergyFields & EnergyParticles
- uint8_t is well defined, char is not
…mOnSoC Fix ComputationalRadiationPhysics#631 Allocation Of Memory On Jetson Boards
- still allows to specify *less* arguments - avoids segfault on "too many" arguments (more are ignored)
…adGridDist Parse gridDist: Avoid Out-of-Bounce Access
- call `setNumSlides(...)` only if movingWindow is active, since this function redistributes the y-offsets (intentionally)
…i/fix-02boolBugCUDA6.5 fix CUDA6.5 int(bool) bug in algorithms
…i/fix-03boolBugCUDA6.5 fix CUDA6.5 int(bool) bug in particle kernel
the index names in `hdf5/writer/Field.hpp` are not ideal (even if the implementation is correct): once `d` is used as an index `[0; simDim]` and once as an index `[0; nComponents]` and same mixed with `i`. we now use `n` consequently for vector components (x, y, z and w) of fields and `d` for *spatial* counts from `0` to `simDim`. `i` is still used if we iterate over linear memory.
- in 2D simulations, the last component (z) of FieldE and FieldB was not initialized again (default: zero)
The plotNumericalHeating tool now supports any number of species.
- increases file by about 12% - decreases time for write_png() call by ~2.3x - part of optimizations in ComputationalRadiationPhysics#693
…hdf5VarsWriteField HDF5 WriteField: Fix Wrong Doc String and Index
…pngCompression PNG Plugin: Use less compression
…f52Drestart Fix ComputationalRadiationPhysics#688 2D Restart Fields :+1: Great job @ax3l .
The message on PNGwriter "NOT FOUND" was wrong, this fixes it. Traditionally, the environment vars controlling a cmake module are all upper case, such as PNGWRITER_ROOT, BOOST_ROOT. On the other hand cmake variables are internally used case sensitive, such as PNGwriter, Boost, ...
…Genv FindPNGwriter: Fix misleading Not-Found Message
…i/topic-multiSpeciesHeatingTool Close ComputationalRadiationPhysics#684 Heating Analyser for Multi Species
The flag combines proton and neutron number and by using the trait those can be accessed.
The pre-compiler define `PARAM_IONIZATION` has been added. In `speciesDefinition.param` the flag `atomicNumbers` has been added to the list of ion flags and Helium is used as ion species.
…flagProtonNeutronNumber Flag for proton and neutron number
…i/fix-restartPlugin Fix ComputationalRadiationPhysics#702 Activate new plugins after restart
- allow instantiation of RNG on the host side - allow instantiation with default constructor
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af5d9d4 Merge pull request #7 from ComputationalRadiationPhysics/fix-mallocMCListExistence 464cf50 Fix: Undefined List for FindmallocMC 96d3dbd Merge pull request #6 from slizzered/hotfix-regression_from_list_with_spaces 0ec533e changed list creation to reference syntax 4c1a34f Required arguments checked exactly when required 0ad59c9 Hotfix for regression bug from prev commit 01c5d7b Merge pull request #5 from slizzered/issue3-mallocMC-module eddc3ec Added documentation about MALLOCMC_ROOT variable 6a7ca13 Also use CMake variable MALLOCMC_ROOT 4cd27c9 removed hardcoded path 2cbaa5f Restructure module FindmallocMC.cmake 232cad5 Merge pull request #1 from ComputationalRadiationPhysics/topic-changToISC 779e84e Propose License Change to ISC git-subtree-dir: thirdParty/cmake-modules git-subtree-split: af5d9d47c539a8dac53c1e7240465384f86d7081
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…ction reduce register footprint
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