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Assemblyscan 1.0.0#9506

Merged

eit-maxlcummins merged 20 commits intonf-core:masternf-core/modules:masterfrom

eit-maxlcummins:assemblyscan_1.0.0eit-maxlcummins/modules:assemblyscan_1.0.0Copy head branch name to clipboard

Jan 15, 2026

Conversation Commits20 (20)Checks Files changed

Merged

Assemblyscan 1.0.0#9506
eit-maxlcummins merged 20 commits intonf-core:masterfrom
eit-maxlcummins:assemblyscan_1.0.0

Commits

Commits on Dec 4, 2025

rebase - git pull --rebase upstream master - merge conflicts
eit-maxlcummins
committed
add missing test for main.nf.test
eit-maxlcummins
committed
simplify string replacement for trinity version eval to remove use of colons - avoids potential yml clash
eit-maxlcummins
committed
update meta.yml to capture new version topics change
eit-maxlcummins
committed
update assemblyscan to v1.0.0, allowing json or tsv output
eit-maxlcummins
committed

Commits on Dec 15, 2025

[automated] Fix linting with Prettier
nf-core-bot
committed
Merge branch 'master' into assemblyscan_1.0.0
prototaxites
authored

Commits on Jan 15, 2026

update versions capturing to new approach and update snapshot

charles-plessy
authored and
eit-maxlcummins
committed
add charles-plessy to authors
eit-maxlcummins
committed
Merge branch 'master' into assemblyscan_1.0.0
SPPearce
authored
combine outputs into single channel
eit-maxlcummins
committed
update meta.yml for dynamic report output and versions topic channel
eit-maxlcummins
committed
more fixes to meta.yml for versions topic
eit-maxlcummins
committed
more fixes to meta.yml for versions topic
eit-maxlcummins
committed
manually add json test from @charles-plessy - some prior git cherry pick issue from my end
eit-maxlcummins
committed
lint module
eit-maxlcummins
committed
remove unnecessary optional flag post output channel merge
eit-maxlcummins
committed
final meta.yml changes :pray:
eit-maxlcummins
committed
[automated] Fix linting with Prettier
nf-core-bot
committed
Merge branch 'master' into assemblyscan_1.0.0
eit-maxlcummins
authored

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