nextflow/25.04.0 package update

nextflow.yaml

@@ -1,6 +1,6 @@
 package:
   name: nextflow
-  version: "24.10.6"
+  version: "25.04.0"
   epoch: 0
   description: A DSL for data-driven computational pipelines.
   copyright:
@@ -28,13 +28,9 @@ pipeline:
   - uses: git-checkout
     with:
       repository: https://github.com/nextflow-io/nextflow.git
-      expected-commit: cad3997dc357a70f44b04ade7c765fe8919faec4
+      expected-commit: c9bd193ab40ea8ccb7602f86866f9004faaf9fd7
       tag: v${{package.version}}
 
-  - uses: patch
-    with:
-      patches: logback-core-1.5.13.patch commons-io-2.14.0.patch
-
   - runs: |
       sed -i 's/jar\.enabled = false/jar.enabled = true/' build.gradle
       ./gradlew build -x test --no-daemon