errors building suffixerator indexes

[nsheff]

for some reason these errors are showing up:

## [13 of 178] sample: hg38-suffixerator_index; pipeline: download_input_files
Writing script to /project/shefflab/deploy/refgenomes_primary/genomes/submission/download_input_files_hg38-suffixerator_index.sub
Job script (n=1; 0.00Gb): /project/shefflab//deploy/refgenomes_primary/genomes/submission/download_input_files_hg38-suffixerator_index.sub
Compute node: udc-ba34-36
Start time: 2020-07-10 17:09:56
/project/shefflab//deploy/refgenomes_primary/genomes/submission/download_input_files_hg38-suffixerator_index.sub: line 8: syntax error near unexpected token `}'
/project/shefflab//deploy/refgenomes_primary/genomes/submission/download_input_files_hg38-suffixerator_index.sub: line 8: `} | tee /project/shefflab//deploy/refgenomes_primary/genomes/submission/download_input_files_hg38-suffixerator_index.log --ignore-interrupts'

Cluster resource failure: hg38_noalt_decoy-suffixerator_index, hg18-suffixerator_index, mm10-suffixerator_index, rn6-suffixerator_index, hg38-suffixerator_index, hg19-suffixerator_index

cat /project/shefflab//deploy/refgenomes_primary/genomes/submission/download_input_files_mm10-suffixerator_index.sub
#!/bin/bash

echo 'Compute node:' `hostname`
echo 'Start time:' `date +'%Y-%m-%d %T'`

{
 
} | tee /project/shefflab//deploy/refgenomes_primary/genomes/submission/download_input_files_mm10-suffixerator_index.log --ignore-interrupts

[nsheff]

it's because I added the 'memlimit' for those. so, it's somehow changing the way looper treats it.

[nsheff]

basically, it now has an entry in "input_value", so it's passing the jinja template check, so it's populating the result.

we need a way to specify more granularly which samples this pipeline should actually be run on. it's not valid for these.