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Merged
pinin4fjords merged 2 commits into from
Oct 23, 2024
Merged

Bump versions for 3.17.0 release #1432

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9b9181c
Bump versions
pinin4fjords Oct 23, 2024
62f4ffe
update changelog
pinin4fjords Oct 23, 2024
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9 changes: 8 additions & 1 deletion CHANGELOG.md
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Expand Up @@ -3,17 +3,24 @@
The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/)
and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).

## dev
## [[3.17.0](https://github.com/nf-core/rnaseq/releases/tag/3.17.0)] - 2024-10-23

### Credits

Special thanks to the following for their contributions to the release:

- [Maxime Garcia](https://github.com/maxulysse)
- [Jonathan Manning](https://github.com/pinin4fjords)
- [Pablo Gonzalez de Aledo](https://github.com/pabloaledo)

### Enhancements & fixes

- [PR #1418](https://github.com/nf-core/rnaseq/pull/1418) - Bump versions back to 3.17.0 after release
- [PR #1422](https://github.com/nf-core/rnaseq/pull/1422) - Bump lots of modules so that conda versions have ARM builds
- [PR #1423](https://github.com/nf-core/rnaseq/pull/1423) - Bump STAR version for version with ARM Conda build
- [PR #1424](https://github.com/nf-core/rnaseq/pull/1424) - Patch sortmerna to 4.3.7 for ARM compatibility
- [PR #1425](https://github.com/nf-core/rnaseq/pull/1425) - Add profile for ARM compatibility
- [PR #1432](https://github.com/nf-core/rnaseq/pull/1432) - Bump versions for 3.17.0 release

## [[3.16.1](https://github.com/nf-core/rnaseq/releases/tag/3.16.1)] - 2024-10-16

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2 changes: 1 addition & 1 deletion nextflow.config
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Expand Up @@ -328,7 +328,7 @@ manifest {
description = """RNA sequencing analysis pipeline for gene/isoform quantification and extensive quality control."""
mainScript = 'main.nf'
nextflowVersion = '!>=24.04.2'
version = '3.17.0dev'
version = '3.17.0'
doi = 'https://doi.org/10.5281/zenodo.1400710'
}

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4 changes: 2 additions & 2 deletions tests/default.nf.test.snap
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"untar": 1.34
},
"Workflow": {
"nf-core/rnaseq": "v3.17.0dev"
"nf-core/rnaseq": "v3.17.0"
}
},
[
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"untar": 1.34
},
"Workflow": {
"nf-core/rnaseq": "v3.17.0dev"
"nf-core/rnaseq": "v3.17.0"
}
},
[
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4 changes: 2 additions & 2 deletions tests/featurecounts_group_type.nf.test.snap
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"untar": 1.34
},
"Workflow": {
"nf-core/rnaseq": "v3.17.0dev"
"nf-core/rnaseq": "v3.17.0"
}
},
[
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"untar": 1.34
},
"Workflow": {
"nf-core/rnaseq": "v3.17.0dev"
"nf-core/rnaseq": "v3.17.0"
}
},
[
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4 changes: 2 additions & 2 deletions tests/hisat2.nf.test.snap
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"untar": 1.34
},
"Workflow": {
"nf-core/rnaseq": "v3.17.0dev"
"nf-core/rnaseq": "v3.17.0"
}
},
[
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"untar": 1.34
},
"Workflow": {
"nf-core/rnaseq": "v3.17.0dev"
"nf-core/rnaseq": "v3.17.0"
}
},
[
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4 changes: 2 additions & 2 deletions tests/kallisto.nf.test.snap
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"untar": 1.34
},
"Workflow": {
"nf-core/rnaseq": "v3.17.0dev"
"nf-core/rnaseq": "v3.17.0"
}
},
[
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"untar": 1.34
},
"Workflow": {
"nf-core/rnaseq": "v3.17.0dev"
"nf-core/rnaseq": "v3.17.0"
}
},
[
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4 changes: 2 additions & 2 deletions tests/min_mapped_reads.nf.test.snap
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"untar": 1.34
},
"Workflow": {
"nf-core/rnaseq": "v3.17.0dev"
"nf-core/rnaseq": "v3.17.0"
}
},
[
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"untar": 1.34
},
"Workflow": {
"nf-core/rnaseq": "v3.17.0dev"
"nf-core/rnaseq": "v3.17.0"
}
},
[
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4 changes: 2 additions & 2 deletions tests/remove_ribo_rna.nf.test.snap
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"untar": 1.34
},
"Workflow": {
"nf-core/rnaseq": "v3.17.0dev"
"nf-core/rnaseq": "v3.17.0"
}
},
[
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"untar": 1.34
},
"Workflow": {
"nf-core/rnaseq": "v3.17.0dev"
"nf-core/rnaseq": "v3.17.0"
}
},
[
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4 changes: 2 additions & 2 deletions tests/salmon.nf.test.snap
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"untar": 1.34
},
"Workflow": {
"nf-core/rnaseq": "v3.17.0dev"
"nf-core/rnaseq": "v3.17.0"
}
},
[
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"untar": 1.34
},
"Workflow": {
"nf-core/rnaseq": "v3.17.0dev"
"nf-core/rnaseq": "v3.17.0"
}
},
[
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4 changes: 2 additions & 2 deletions tests/skip_qc.nf.test.snap
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"untar": 1.34
},
"Workflow": {
"nf-core/rnaseq": "v3.17.0dev"
"nf-core/rnaseq": "v3.17.0"
}
},
[
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"untar": 1.34
},
"Workflow": {
"nf-core/rnaseq": "v3.17.0dev"
"nf-core/rnaseq": "v3.17.0"
}
},
[
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2 changes: 1 addition & 1 deletion tests/skip_trimming.nf.test.snap
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"untar": 1.34
},
"Workflow": {
"nf-core/rnaseq": "v3.17.0dev"
"nf-core/rnaseq": "v3.17.0"
}
},
[
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4 changes: 2 additions & 2 deletions tests/star_rsem.nf.test.snap
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"untar": 1.34
},
"Workflow": {
"nf-core/rnaseq": "v3.17.0dev"
"nf-core/rnaseq": "v3.17.0"
}
},
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"untar": 1.34
},
"Workflow": {
"nf-core/rnaseq": "v3.17.0dev"
"nf-core/rnaseq": "v3.17.0"
}
},
[
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2 changes: 1 addition & 1 deletion workflows/rnaseq/assets/multiqc/multiqc_config.yml
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report_comment: >
This report has been generated by the <a href="https://github.com/nf-core/rnaseq/tree/dev" target="_blank">nf-core/rnaseq</a> analysis pipeline. For information about how to interpret these results, please see the <a href="https://nf-co.re/rnaseq/dev/docs/output" target="_blank">documentation</a>.
This report has been generated by the <a href="https://github.com/nf-core/rnaseq/releases/tag/3.17.0" target="_blank">nf-core/rnaseq</a> analysis pipeline. For information about how to interpret these results, please see the <a href="https://nf-co.re/rnaseq/3.17.0/docs/output" target="_blank">documentation</a>.
report_section_order:
# Important checks and failures
sample-status:
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