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fix(seqsero2): rename emit: versions to versions_seqsero2 per nf-core convention
- main.nf: emit: versions -> emit: versions_seqsero2 - meta.yml: output key versions: -> versions_seqsero2: - Aligns with nf-core standard (1,363+ modules use versions_<tool>)
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Lines changed: 3 additions & 3 deletions

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modules/nf-core/seqsero2/main.nf

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@@ -14,7 +14,7 @@ process SEQSERO2 {
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tuple val(meta), path("results/*_log.txt") , emit: log
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tuple val(meta), path("results/*_result.tsv"), emit: tsv
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tuple val(meta), path("results/*_result.txt"), emit: txt
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tuple val("${task.process}"), val('seqsero2'), eval('SeqSero2_package.py --version 2>&1 | sed "s/^.*SeqSero2_package.py //"'), topic: versions, emit: versions
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tuple val("${task.process}"), val('seqsero2'), eval('SeqSero2_package.py --version 2>&1 | sed "s/^.*SeqSero2_package.py //"'), topic: versions, emit: versions_seqsero2
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when:
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task.ext.when == null || task.ext.when

modules/nf-core/seqsero2/meta.yml

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@@ -61,7 +61,7 @@ output:
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description: Detailed summary of the SeqSero2 results
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pattern: "*_result.txt"
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ontologies: []
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versions:
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versions_seqsero2:
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- - ${task.process}:
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type: string
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description: The name of the process
@@ -72,7 +72,7 @@ output:
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type: eval
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description: The expression to obtain the version of the tool
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topics:
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versions:
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versions_seqsero2:
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- - ${task.process}:
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type: string
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description: The name of the process

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