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fix stub
1 parent fe8afa9 commit 2444177

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modules/nf-core/snakemake/main.nf

Lines changed: 4 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -34,10 +34,14 @@ process SNAKEMAKE {
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--snakefile ${snakefile}
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"""
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stub:
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def args = task.ext.args ?: ''
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def cores = task.cpus ? "--cores ${task.cpus}" : "--cores all"
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"""
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export XDG_CACHE_HOME=\$PWD/snakemake_cache
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mkdir -p \$XDG_CACHE_HOME
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snakemake \\
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${args} \\
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--snakefile ${snakefile} \\

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