Improve maintainability and PEP 8 compliance for Chakra trace generator

[TaekyungHeo]

Summary

• This PR depends on Update pyproject.toml to include new linting rules #89
• Improve maintainability and PEP 8 compliance for Chakra trace generator

Test Plan

$ pip install .
Processing /Users/theo/chakra
  Installing build dependencies ... done
  Getting requirements to build wheel ... done
  Installing backend dependencies ... done
  Preparing metadata (pyproject.toml) ... done
Requirement already satisfied: protobuf==4.* in /Users/theo/venv/lib/python3.10/site-packages (from chakra==0.0.4) (4.23.4)
Requirement already satisfied: graphviz in /Users/theo/venv/lib/python3.10/site-packages (from chakra==0.0.4) (0.20.1)
Requirement already satisfied: networkx in /Users/theo/venv/lib/python3.10/site-packages (from chakra==0.0.4) (3.2.1)
Requirement already satisfied: pydot in /Users/theo/venv/lib/python3.10/site-packages (from chakra==0.0.4) (2.0.0)
Requirement already satisfied: pyparsing>=3 in /Users/theo/venv/lib/python3.10/site-packages (from pydot->chakra==0.0.4) (3.1.1)
Building wheels for collected packages: chakra
  Building wheel for chakra (pyproject.toml) ... done
  Created wheel for chakra: filename=chakra-0.0.4-py3-none-any.whl size=51730 sha256=c39e4c1c3bd8ed8f8cf590fe6e6bcbc7956490c3c158178212dd63fc8fa85d35
  Stored in directory: /private/var/folders/z0/c9mq5j4s6n14n0_gs7nlt6mc0000gp/T/pip-ephem-wheel-cache-ejdfuipi/wheels/fa/dc/75/2163b4163bf1e9cf3c7f1cf69fa03716fb707b8c4f5cb271e8
Successfully built chakra
Installing collected packages: chakra
  Attempting uninstall: chakra
    Found existing installation: chakra 0.0.4
    Uninstalling chakra-0.0.4:
      Successfully uninstalled chakra-0.0.4
Successfully installed chakra-0.0.4

$ chakra_generator 

$ ls
two_comp_nodes_dependent.61.et
two_comp_nodes_dependent.62.et
two_comp_nodes_dependent.63.et
two_comp_nodes_dependent.7.et
two_comp_nodes_dependent.8.et
two_comp_nodes_dependent.9.et
two_comp_nodes_independent.0.et
two_comp_nodes_independent.1.et
two_comp_nodes_independent.10.et
two_comp_nodes_independent.11.et
two_comp_nodes_independent.12.et
two_comp_nodes_independent.13.et
two_comp_nodes_independent.14.et
two_comp_nodes_independent.15.et
two_comp_nodes_independent.16.et
two_comp_nodes_independent.17.et
two_comp_nodes_independent.18.et
two_comp_nodes_independent.19.et
two_comp_nodes_independent.2.et
two_comp_nodes_independent.20.et
two_comp_nodes_independent.21.et
two_comp_nodes_independent.22.et
two_comp_nodes_independent.23.et
two_comp_nodes_independent.24.et
two_comp_nodes_independent.25.et
two_comp_nodes_independent.26.et
two_comp_nodes_independent.27.et
two_comp_nodes_independent.28.et
two_comp_nodes_independent.29.et
two_comp_nodes_independent.3.et
two_comp_nodes_independent.30.et
two_comp_nodes_independent.31.et
two_comp_nodes_independent.32.et
two_comp_nodes_independent.33.et
two_comp_nodes_independent.34.et
two_comp_nodes_independent.35.et
two_comp_nodes_independent.36.et
two_comp_nodes_independent.37.et
two_comp_nodes_independent.38.et
two_comp_nodes_independent.39.et
two_comp_nodes_independent.4.et
two_comp_nodes_independent.40.et
two_comp_nodes_independent.41.et
two_comp_nodes_independent.42.et
two_comp_nodes_independent.43.et
two_comp_nodes_independent.44.et
two_comp_nodes_independent.45.et
two_comp_nodes_independent.46.et
two_comp_nodes_independent.47.et
two_comp_nodes_independent.48.et
two_comp_nodes_independent.49.et
two_comp_nodes_independent.5.et

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