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The adsorption workflow seems to produce inconsistent adsorption sites for the molecule, although using structure matching shows that these sites are equivalent

This leads to issues when _check_poscar is called, since the adsorbed molecule site(s) cannot be found. Tests pass in numpy >= 2, can't migrate up to numpy > 2 in CI without isolating certain packages (e.g., matgl)

Temporarily remove the POSCAR check just for those jobs which work on the surface + adsorption

Also remove some unused features and fix bugs in adsorption workflow related to removing sites

@esoteric-ephemera esoteric-ephemera enabled auto-merge (squash) October 14, 2025 20:16
@esoteric-ephemera esoteric-ephemera merged commit c2f720e into main Oct 14, 2025
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@esoteric-ephemera esoteric-ephemera deleted the fixads branch October 14, 2025 20:21
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2 participants