Build HDF5 2.0

.github/workflows/build-image.yml

@@ -33,7 +33,7 @@ jobs:
            platforms: linux/arm64
            runs-on: ubuntu-24.04-arm
     steps:
-    - uses: actions/checkout@v4
+    - uses: actions/checkout@v6
 
     - name: Login to GitHub Container Registry
       uses: docker/login-action@v3

Dockerfile_manylinux_2_28_aarch64

@@ -1,6 +1,6 @@
 FROM quay.io/pypa/manylinux_2_28_aarch64
 
-ENV HDF5_VERSION=1.14.6
+ENV HDF5_VERSION=2.0.0
 ENV HDF5_DIR=/usr/local
 
 COPY install_libaec.sh /tmp/install_libaec.sh

Dockerfile_manylinux_2_28_x86_64

@@ -1,6 +1,6 @@
 FROM quay.io/pypa/manylinux_2_28_x86_64
 
-ENV HDF5_VERSION=1.14.6
+ENV HDF5_VERSION=2.0.0
 ENV HDF5_DIR=/usr/local
 
 COPY install_libaec.sh /tmp/install_libaec.sh

Dockerfile_musllinux_1_2_aarch64

@@ -1,6 +1,6 @@
 FROM quay.io/pypa/musllinux_1_2_aarch64
 
-ENV HDF5_VERSION=1.14.6
+ENV HDF5_VERSION=2.0.0
 ENV HDF5_DIR=/usr/local
 
 COPY install_libaec.sh /tmp/install_libaec.sh

Dockerfile_musllinux_1_2_x86_64

@@ -1,6 +1,6 @@
 FROM quay.io/pypa/musllinux_1_2_x86_64
 
-ENV HDF5_VERSION=1.14.6
+ENV HDF5_VERSION=2.0.0
 ENV HDF5_DIR=/usr/local
 
 COPY install_libaec.sh /tmp/install_libaec.sh

install_hdf5.sh

@@ -22,14 +22,25 @@ fi
 echo "Downloading & unpacking HDF5 ${HDF5_VERSION}"
 HDF5_TAG="hdf5_${HDF5_VERSION}"
 curl -fsSLO "https://github.com/HDFGroup/hdf5/archive/refs/tags/${HDF5_TAG}.tar.gz"
-tar -xzvf $HDF5_TAG.tar.gz
+tar -xzf $HDF5_TAG.tar.gz
 pushd hdf5-$HDF5_TAG
-chmod u+x autogen.sh
 
 echo "Configuring, building & installing HDF5 ${HDF5_VERSION} to ${HDF5_DIR}"
-./configure --prefix $HDF5_DIR --enable-build-mode=production --with-szlib
-make -j $(nproc)
-make install
+mkdir build
+cmake -S . -B build \
+    -D CMAKE_BUILD_TYPE=Release \
+    -D CMAKE_INSTALL_PREFIX="$HDF5_DIR" \
+    -D BUILD_TESTING=OFF \
+    -D BUILD_STATIC_LIBS=OFF \
+    -D HDF5_BUILD_EXAMPLES=OFF \
+    -D HDF5_BUILD_TOOLS=OFF \
+    -D HDF5_BUILD_UTILS=OFF \
+    -D HDF5_ALLOW_EXTERNAL_SUPPORT:STRING=NO \
+    -D HDF5_ENABLE_ZLIB_SUPPORT=ON \
+    -D HDF5_ENABLE_SZIP_SUPPORT=ON
+
+make -C build -j "$(nproc)"
+make -C build install
 popd
 
 # Clean up to limit the size of the Docker image

install_libaec.sh

@@ -4,19 +4,22 @@ set -euo pipefail
 
 pushd /tmp
 
-aec_version="1.1.3"
+aec_version="1.1.4"
 
 echo "Downloading libaec"
-# The URL includes a hash, so it needs to change if the version does
-curl -fsSLO https://gitlab.dkrz.de/-/project/117/uploads/dc5fc087b645866c14fa22320d91fb27/libaec-${aec_version}.tar.gz
-tar zxf libaec-$aec_version.tar.gz
+curl -fsSLO https://gitlab.dkrz.de/k202009/libaec/-/archive/v${aec_version}/libaec-v${aec_version}.tar.gz
+tar zxf libaec-v$aec_version.tar.gz
 
 echo "Building & installing libaec"
-pushd libaec-$aec_version
-./configure
-make
-make install
+pushd libaec-v$aec_version
+mkdir build
+cmake -S . -B build \
+    -D CMAKE_BUILD_TYPE=Release \
+    -D BUILD_STATIC_LIBS=OFF \
+    -D BUILD_TESTING=OFF
+make -C build -j "$(nproc)"
+make -C build install
 
 # Clean up the files from the build
 popd
-rm -r libaec-$aec_version libaec-$aec_version.tar.gz
+rm -r libaec-v$aec_version libaec-v$aec_version.tar.gz