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I am just catching up with some bookmarks and remembered your repo here :). As someone who constantly fuzzes about the ideal project structure, that's actually pretty cool. I have been using an adapted version of the data science cookiecutter for generic ML projects, but nothing sophisticated like this here with code stubs.
Haven't thoroughly played with it yet, though, besides creating an example folder and looking at the pl_module.py and datamodule.py files, which look good to me!
If you are interested in that, I am sure my colleague @Borda would be happy to assist with questions & technical details -- he built this thing, so he probably knows best :)