Skip to content

{bio}[foss/2018b] GATK-4.0.10.0 w/ Python 3.6.6 #6975

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom
Merged
boegel merged 3 commits into from
Oct 12, 2018
Merged

{bio}[foss/2018b] GATK-4.0.10.0 w/ Python 3.6.6 #6975

boegel merged 3 commits into from
Oct 12, 2018

Conversation

@fizwit
Copy link
Contributor

@fizwit fizwit commented Oct 9, 2018

GATK-4.0.10.0 - Edited to make pep8 compliant, added javaver, pyver.
Update GATK for 2018b, using Java 1.8.0_181 with 2018b

@boegel boegel added the update label Oct 9, 2018
boegel
boegel requested changes Oct 9, 2018
View reviewed changes
@boegel boegel changed the title GATK-4.0.10.0 {bio}[foss/2018b] GATK-4.0.10.0 w/ Python 3.6.6 Oct 9, 2018
@boegel boegel added this to the 3.7.1 milestone Oct 12, 2018
@boegel
Copy link
Member

boegel commented Oct 12, 2018

Test report by @boegel
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in this PR)
node2605.swalot.os - Linux centos linux 7.5.1804, Intel(R) Xeon(R) CPU E5-2660 v3 @ 2.60GHz, Python 2.7.5
See https://gist.github.com/f3c42c1562856a8f36d906ddbae609f4 for a full test report.

@boegel
Copy link
Member

boegel commented Oct 12, 2018

Test report by @boegel
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in this PR)
node2127.delcatty.os - Linux centos linux 7.5.1804, Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz, Python 2.7.5
See https://gist.github.com/38a46d355188327b1224b567a995cd1f for a full test report.

@boegel
Copy link
Member

boegel commented Oct 12, 2018

Test report by @boegel
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in this PR)
node3126.skitty.os - Linux centos linux 7.5.1804, Intel(R) Xeon(R) Gold 6140 CPU @ 2.30GHz, Python 2.7.5
See https://gist.github.com/5809080cee48f8b69f25df0ff27ec685 for a full test report.

@boegel
Copy link
Member

boegel commented Oct 12, 2018

Going in, thanks @fizwit!

@boegel boegel merged commit d745e8c into easybuilders:develop Oct 12, 2018
@fizwit fizwit deleted the GATK branch November 14, 2019 23:31
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Reviewers

@boegel boegel boegel approved these changes

Assignees

No one assigned

Labels

update

Projects

None yet

Milestone

3.7.1

Development

Successfully merging this pull request may close these issues.

2 participants

@fizwit @boegel