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{tools}[GCCcore/13.2.0] Jupyter-bundle v20240522, nbclassic v1.0.0, jupyter-server-proxy v4.1.2, ... #20613
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Merged
migueldiascosta
merged 2 commits into
easybuilders:develop
from
lexming:20240523133406_new_pr_Jupyter-bundle20240522
May 24, 2024
Merged
{tools}[GCCcore/13.2.0] Jupyter-bundle v20240522, nbclassic v1.0.0, jupyter-server-proxy v4.1.2, ... #20613
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53 changes: 53 additions & 0 deletions
53
easybuild/easyconfigs/a/aiohttp/aiohttp-3.9.5-GCCcore-13.2.0.eb
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,53 @@ | ||
| easyblock = 'PythonBundle' | ||
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| name = 'aiohttp' | ||
| version = '3.9.5' | ||
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| homepage = 'https://github.com/aio-libs/aiohttp' | ||
| description = "Asynchronous HTTP client/server framework for asyncio and Python." | ||
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| toolchain = {'name': 'GCCcore', 'version': '13.2.0'} | ||
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| builddependencies = [ | ||
| ('binutils', '2.40'), | ||
| ('poetry', '1.6.1'), | ||
| ] | ||
|
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| dependencies = [ | ||
| ('Python', '3.11.5'), | ||
| ('Python-bundle-PyPI', '2023.10'), | ||
| ] | ||
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| use_pip = True | ||
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| # aioredis and aiosignal do not depend on aiohttp, but are commonly used together and share dependencies | ||
| exts_list = [ | ||
| ('multidict', '6.0.5', { | ||
| 'checksums': ['f7e301075edaf50500f0b341543c41194d8df3ae5caf4702f2095f3ca73dd8da'], | ||
| }), | ||
| ('expandvars', '0.12.0', { | ||
| 'checksums': ['7d1adfa55728cf4b5d812ece3d087703faea953e0c0a1a78415de9df5024d844'], | ||
| }), | ||
| ('yarl', '1.9.4', { | ||
| 'checksums': ['566db86717cf8080b99b58b083b773a908ae40f06681e87e589a976faf8246bf'], | ||
| }), | ||
| ('frozenlist', '1.4.1', { | ||
| 'checksums': ['c037a86e8513059a2613aaba4d817bb90b9d9b6b69aace3ce9c877e8c8ed402b'], | ||
| }), | ||
| ('async-timeout', '4.0.3', { | ||
| 'checksums': ['4640d96be84d82d02ed59ea2b7105a0f7b33abe8703703cd0ab0bf87c427522f'], | ||
| }), | ||
| ('aiosignal', '1.3.1', { | ||
| 'checksums': ['54cd96e15e1649b75d6c87526a6ff0b6c1b0dd3459f43d9ca11d48c339b68cfc'], | ||
| }), | ||
| ('aiohappyeyeballs', '2.3.2', { | ||
| 'checksums': ['77e15a733090547a1f5369a1287ddfc944bd30df0eb8993f585259c34b405f4e'], | ||
| }), | ||
| (name, version, { | ||
| 'checksums': ['edea7d15772ceeb29db4aff55e482d4bcfb6ae160ce144f2682de02f6d693551'], | ||
| }), | ||
| ] | ||
|
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| sanity_pip_check = True | ||
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| moduleclass = 'lib' |
26 changes: 26 additions & 0 deletions
26
easybuild/easyconfigs/j/Jupyter-bundle/Jupyter-bundle-20240522-GCCcore-13.2.0.eb
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,26 @@ | ||
| easyblock = 'Bundle' | ||
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| name = 'Jupyter-bundle' | ||
| version = '20240522' | ||
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| homepage = "https://jupyter.org/" | ||
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| description = """ | ||
| This bundle collects a range of Jupyter interfaces (Lab, Notebook and nbclassic), | ||
| extensions (Jupyter Server Proxy, Jupyter Resource Monitor, Jupyter Lmod) and | ||
| the JupyterHub. | ||
| """ | ||
|
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| toolchain = {'name': 'GCCcore', 'version': '13.2.0'} | ||
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| dependencies = [ | ||
| ('JupyterHub', '4.1.5'), | ||
| ('JupyterLab', '4.2.0'), | ||
| ('JupyterNotebook', '7.2.0'), | ||
| ('nbclassic', '1.0.0'), | ||
| ('jupyter-server-proxy', '4.1.2'), | ||
| # ('jupyterlmod', '5.0.0'), -- not ready yet, waiting for https://github.com/cmd-ntrf/jupyter-lmod/pull/70 | ||
| ('jupyter-resource-usage', '1.0.2'), | ||
| ] | ||
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| moduleclass = 'tools' | ||
41 changes: 41 additions & 0 deletions
41
...build/easyconfigs/j/jupyter-resource-usage/jupyter-resource-usage-1.0.2-GCCcore-13.2.0.eb
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,41 @@ | ||
| easyblock = 'PythonBundle' | ||
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| name = 'jupyter-resource-usage' | ||
| version = "1.0.2" | ||
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| homepage = 'https://github.com/jupyter-server/jupyter-resource-usage' | ||
| description = "Jupyter Notebook Extension for monitoring your own Resource Usage (memory and/or CPU)" | ||
|
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| toolchain = {'name': 'GCCcore', 'version': '13.2.0'} | ||
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| builddependencies = [ | ||
| ('binutils', '2.40'), | ||
| ('hatch-jupyter-builder', '0.9.1'), | ||
| ] | ||
| dependencies = [ | ||
| ('Python', '3.11.5'), | ||
| ('IPython', '8.17.2'), | ||
| ('jupyter-server', '2.14.0'), | ||
| ] | ||
|
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| sanity_pip_check = True | ||
| use_pip = True | ||
|
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| exts_list = [ | ||
| ('jupyter_resource_usage', version, { | ||
| 'checksums': ['20babc5a63fd53724b12e50b9046ca07784fb56004c39d0442990116fb925a4b'], | ||
| }), | ||
| ] | ||
|
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| sanity_check_paths = { | ||
| 'files': [], | ||
| 'dirs': [ | ||
| 'lib/python%(pyshortver)s/site-packages/jupyter_resource_usage', | ||
| 'share/jupyter' | ||
| ], | ||
| } | ||
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| # Add the notebook extension to the search path for jupyter notebooks | ||
| modextrapaths = {'EB_ENV_JUPYTER_ROOT': ''} | ||
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| moduleclass = 'tools' |
43 changes: 43 additions & 0 deletions
43
easybuild/easyconfigs/j/jupyter-server-proxy/jupyter-server-proxy-4.1.2-GCCcore-13.2.0.eb
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,43 @@ | ||
| easyblock = 'PythonBundle' | ||
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| name = 'jupyter-server-proxy' | ||
| version = '4.1.2' | ||
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| homepage = 'https://github.com/jupyterhub/jupyter-server-proxy' | ||
| description = """Jupyter Server Proxy lets you run arbitrary external processes | ||
| (such as RStudio, Shiny Server, Syncthing, PostgreSQL, Code Server, etc) | ||
| alongside your notebook server and provide authenticated web access to them | ||
| using a path like /rstudio next to others like /lab. Alongside the python | ||
| package that provides the main functionality, the JupyterLab extension | ||
| (@jupyterlab/server-proxy) provides buttons in the JupyterLab launcher window | ||
| to get to RStudio for example.""" | ||
|
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| toolchain = {'name': 'GCCcore', 'version': '13.2.0'} | ||
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| builddependencies = [ | ||
| ('binutils', '2.40'), | ||
| ('hatch-jupyter-builder', '0.9.1'), | ||
| ] | ||
| dependencies = [ | ||
| ('Python', '3.11.5'), | ||
| ('IPython', '8.17.2'), | ||
| ('jupyter-server', '2.14.0'), | ||
| ('OpenSSL', '1.1', '', SYSTEM), | ||
| ('aiohttp', '3.9.5'), | ||
| ] | ||
|
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| sanity_pip_check = True | ||
| use_pip = True | ||
|
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| exts_list = [ | ||
| ('simpervisor', '1.0.0', { | ||
| 'checksums': ['7eb87ca86d5e276976f5bb0290975a05d452c6a7b7f58062daea7d8369c823c1'], | ||
| }), | ||
| ('jupyter_server_proxy', version, { | ||
| 'checksums': ['6fd8ce88a0100e637b48f1d3aa32f09672bcb2813dc057d70567f0a40b1237f5'], | ||
| }), | ||
| ] | ||
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| modextrapaths = {'EB_ENV_JUPYTER_ROOT': ''} | ||
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| moduleclass = 'tools' |
51 changes: 51 additions & 0 deletions
51
easybuild/easyconfigs/n/nbclassic/nbclassic-1.0.0-GCCcore-13.2.0.eb
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,51 @@ | ||
| easyblock = 'PythonPackage' | ||
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| name = 'nbclassic' | ||
| version = "1.0.0" | ||
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| homepage = 'https://jupyter.org/' | ||
| description = """NbClassic provides a backwards compatible Jupyter Notebook interface | ||
| that you can install side-by-side with the latest versions: That way, you can fearlessly | ||
| upgrade without worrying about your classic extensions and customizations breaking.""" | ||
|
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| toolchain = {'name': 'GCCcore', 'version': '13.2.0'} | ||
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| builddependencies = [ | ||
| ('binutils', '2.40'), | ||
| ('maturin', '1.3.1'), | ||
| ] | ||
| dependencies = [ | ||
| ('Python', '3.11.5'), | ||
| ('jupyter-server', '2.14.0'), | ||
| ] | ||
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| sources = [SOURCE_TAR_GZ] | ||
| patches = ['nbclassic-1.0.0_fix_setup_version.patch'] | ||
| checksums = [ | ||
| {'nbclassic-1.0.0.tar.gz': '0ae11eb2319455d805596bf320336cda9554b41d99ab9a3c31bf8180bffa30e3'}, | ||
| {'nbclassic-1.0.0_fix_setup_version.patch': 'c26d91ac1d0cea2b361b2619076acdaf5fcd5ff2363d9e5f5e1bd737b4b50736'}, | ||
| ] | ||
|
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| download_dep_fail = True | ||
| sanity_pip_check = True | ||
| use_pip = True | ||
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| local_binaries = [ | ||
| 'jupyter-nbclassic', | ||
| 'jupyter-nbclassic-bundlerextension', | ||
| 'jupyter-nbclassic-extension', | ||
| 'jupyter-nbclassic-serverextension', | ||
| ] | ||
| sanity_check_paths = { | ||
| 'files': ['bin/%s' % x for x in local_binaries], | ||
| 'dirs': [], | ||
| } | ||
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| sanity_check_commands = ['jupyter nbclassic --help'] | ||
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| modextrapaths = { | ||
| 'JUPYTER_CONFIG_PATH': 'etc/jupyter', | ||
| 'JUPYTER_PATH': 'share/jupyter', | ||
| } | ||
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| moduleclass = 'tools' |
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@lexming assuming the tests are successful and this is merged as is, you'll come back to this later? or should we simply hold off merging this for now?
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We can merge the bundle without
jupyterlmodfor the moment. I left the comment so that people know why it is not there compared to the previous bundle. I'll make another PR whenever it is released.