{lang}[intel/2019b] R v3.6.2

[migueldiascosta]

(created using eb --new-pr)

noticed that there isn't an intel/2019b easyconfig - this one is basically the foss/2019b one with the intel specific extension patches from intel/2019a, seems to work, but I may be missing something

[migueldiascosta]

I suppose the ppc patch is irrelevant here, but I'll wait for further feedback

[migueldiascosta]

Test report by @migueldiascosta
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in this PR)
sms - Linux centos linux 7.6.1810, x86_64, AMD EPYC 7601 32-Core Processor (zen), Python 2.7.5
See https://gist.github.com/1b0b101a130148b6845c7c6579a3c6e2 for a full test report.

[boegel]

@boegelbot please test @ generoso

[boegelbot]

@boegel: Request for testing this PR well received on generoso

PR test command 'EB_PR=11298 EB_ARGS= /apps/slurm/default/bin/sbatch --job-name test_PR_11298 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

• exit code: 0
• output:

Submitted batch job 7828

Test results coming soon (I hope)...

- notification for comment with ID 694436193 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

[boegelbot]

Test report by @boegelbot
FAILED
Build succeeded for 0 out of 1 (1 easyconfigs in this PR)
generoso-x-1 - Linux centos linux 8.2.2004, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/24a3ff16383b1ef8fa0dc94f5bd31ee0 for a full test report.

[boegel]

lgtm after visual review

[boegel]

Test report by @boegel
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in this PR)
node3153.skitty.os - Linux centos linux 7.8.2003, x86_64, Intel(R) Xeon(R) Gold 6140 CPU @ 2.30GHz, Python 3.6.8
See https://gist.github.com/93af5b9cd9da13f3376d15538aeac204 for a full test report.

[boegel]

Test report by @boegel
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in this PR)
node2405.golett.os - Linux centos linux 7.8.2003, x86_64, Intel(R) Xeon(R) CPU E5-2680 v3 @ 2.50GHz (haswell), Python 2.7.5
See https://gist.github.com/605be5cc2bc0a4f4cc39440ce3a77748 for a full test report.

[boegel]

Problem on CentOS 8:

arithmetic.c(61): warning #274: declaration is not visible outside of function
  int matherr(struct exception *exc)
                     ^

arithmetic.c(63): error: pointer to incomplete class type is not allowed
      switch (exc->type) {
              ^

arithmetic.c(64): error: identifier "DOMAIN" is undefined
      case DOMAIN:
           ^

arithmetic.c(65): error: identifier "SING" is undefined
      case SING:
           ^

arithmetic.c(68): error: identifier "OVERFLOW" is undefined
      case OVERFLOW:
           ^

arithmetic.c(71): error: identifier "UNDERFLOW" is undefined
      case UNDERFLOW:
           ^

see https://community.intel.com/t5/Intel-C-Compiler/Error-when-compiling-R-from-source-code-ubuntu-18-04/td-p/1176401

[boegel]

I'm working on a (proper) patch to fix the CentOS 8 issue, that should not cause trouble on older OS versions...

edit: see migueldiascosta#31

[migueldiascosta]

@boegelbot please test @ generoso

[boegelbot]

@migueldiascosta: Request for testing this PR well received on generoso

PR test command 'EB_PR=11298 EB_ARGS= /apps/slurm/default/bin/sbatch --job-name test_PR_11298 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

• exit code: 0
• output:

Submitted batch job 7830

Test results coming soon (I hope)...

- notification for comment with ID 694776552 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

[boegelbot]

Test report by @boegelbot
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in this PR)
generoso-x-1 - Linux centos linux 8.2.2004, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/c884519b6183c7f8c8e76284dda73a50 for a full test report.

[boegel]

Test report by @boegel
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in this PR)
node3123.skitty.os - Linux centos linux 7.8.2003, x86_64, Intel(R) Xeon(R) Gold 6140 CPU @ 2.30GHz, Python 3.6.8
See https://gist.github.com/de53462c33d319ca6dac36d40f5c0e8a for a full test report.

[boegel]

Going in, thanks @migueldiascosta!