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repackage after update doi of allen cord #742

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Merged
adamltyson merged 2 commits into from
Feb 3, 2026
Merged

repackage after update doi of allen cord #742

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9543576
update doi of allen cord
PolarBean Feb 2, 2026
cdff2aa
increment version
PolarBean Feb 2, 2026
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10 changes: 7 additions & 3 deletions atlas_scripts/allen_cord.py
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Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
"""Script to package the Allen Cord Atlas."""

__version__ = "1"
__version__ = "2"

import json
import time
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ATLAS_NAME = "allen_cord"
SPECIES = "Mus musculus"
ATLAS_LINK = "https://data.mendeley.com/datasets/4rrggzv5d5/1"
CITATION = "Fiederling et al. 2021, https://doi.org/10.1101/2021.05.06.443008"
CITATION = (
"Fiederling et al. 2021, https://doi.org/10.1016/j.crmeth.2021.100074"
)
ORIENTATION = "asr"
RESOLUTION = (20, 10, 10)
ROOT_ID = 250
ATLAS_FILE_URL = "https://prod-dcd-datasets-cache-zipfiles.s3.eu-west-1.amazonaws.com/4rrggzv5d5-1.zip"
ATLAS_FILE_URL = (
"https://data.mendeley.com/public-api/zip/4rrggzv5d5/download/1"
)
ATLAS_PACKAGER = "MetaCell LLC, Ltd."


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