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Tools for Generation of Hybrid recordings

enhancementNew feature or requestNew feature or request

hybridRelated to Hybrid testingRelated to Hybrid testing

Status: Merged (completed).

SpikeInterface/spikeinterfacenumber 2436

#2436 In SpikeInterface/spikeinterface;

· by yger was closed on Jun 29, 2024

Implementing read_spikeglx_event()

extractorsRelated to extractors moduleRelated to extractors module

Status: Merged (completed).

SpikeInterface/spikeinterfacenumber 2442

#2442 In SpikeInterface/spikeinterface;

· by manimoh was closed on Jun 24, 2024

Make binary recording memmap efficient III (Avoiding spikes by only reserving memory equal to the trace)

coreChanges to core moduleChanges to core module

performancePerformance issues/improvementsPerformance issues/improvements

Status: Merged (completed).

SpikeInterface/spikeinterfacenumber 1781

#1781 In SpikeInterface/spikeinterface;

· by h-mayorquin was closed on Jul 5, 2024

Proposal of format to hold the manual curation information

curationRelated to curation moduleRelated to curation module

hackathon-24Contributions during the SpikeInterface Hackathon May 24Contributions during the SpikeInterface Hackathon May 24

Status: Merged (completed).

SpikeInterface/spikeinterfacenumber 2933

#2933 In SpikeInterface/spikeinterface;

· by remi-pr was closed on Jun 18, 2024

Internal motion API, aka Motion object

hackathon-24Contributions during the SpikeInterface Hackathon May 24Contributions during the SpikeInterface Hackathon May 24

motion correctionQuestions related to motion correctionQuestions related to motion correction

Status: Merged (completed).

SpikeInterface/spikeinterfacenumber 2915

#2915 In SpikeInterface/spikeinterface;

· by cwindolf was closed on Jun 19, 2024

Remove unused extractor attribute extractor_name

deprecationsRelated to code deprecationRelated to code deprecation

extractorsRelated to extractors moduleRelated to extractors module

Status: Merged (completed).

SpikeInterface/spikeinterfacenumber 2874

#2874 In SpikeInterface/spikeinterface;

· by h-mayorquin was closed on Jul 3, 2024

Fix bug in plot templates

widgetsRelated to widgets moduleRelated to widgets module

Status: Merged (completed).

SpikeInterface/spikeinterfacenumber 2850

#2850 In SpikeInterface/spikeinterface;

· by DradeAW was closed on Jul 15, 2024

Possible fix for #2837

bugSomething isn't workingSomething isn't working

coreChanges to core moduleChanges to core module

Status: Merged (completed).

SpikeInterface/spikeinterfacenumber 2854

#2854 In SpikeInterface/spikeinterface;

· by h-mayorquin was closed on Jun 19, 2024

Analyzer docstring cleanup

documentationImprovements or additions to documentationImprovements or additions to documentation

Status: Merged (completed).

SpikeInterface/spikeinterfacenumber 3220

#3220 In SpikeInterface/spikeinterface;

· by zm711 was closed on Jul 18, 2024

Propagate option for using neo channel names as ids in all neo extractors without changing the deafult behavior

extractorsRelated to extractors moduleRelated to extractors module

Status: Merged (completed).

SpikeInterface/spikeinterfacenumber 3195

#3195 In SpikeInterface/spikeinterface;

· by h-mayorquin was closed on Jul 15, 2024

Fix naming when all_annotations=True in neo base extractors

extractorsRelated to extractors moduleRelated to extractors module

Status: Merged (completed).

SpikeInterface/spikeinterfacenumber 3198

#3198 In SpikeInterface/spikeinterface;

· by h-mayorquin was closed on Jul 15, 2024

Remove name class attribute in preprocessing module

preprocessingRelated to preprocessing moduleRelated to preprocessing module

Status: Merged (completed).

SpikeInterface/spikeinterfacenumber 3200

#3200 In SpikeInterface/spikeinterface;

· by h-mayorquin was closed on Jul 15, 2024

Patch for SC2 after release AND bugs in auto merge

bugSomething isn't workingSomething isn't working

sortersRelated to sorters moduleRelated to sorters module

Status: Merged (completed).

SpikeInterface/spikeinterfacenumber 3213

#3213 In SpikeInterface/spikeinterface;

· by yger was closed on Jul 17, 2024

Prepare release 0.101.0

Status: Merged (completed).

SpikeInterface/spikeinterfacenumber 3234

#3234 In SpikeInterface/spikeinterface;

· by alejoe91 was closed on Jul 19, 2024

Better error message for BaseExtractor.load()

coreChanges to core moduleChanges to core module

Status: Merged (completed).

SpikeInterface/spikeinterfacenumber 3170

#3170 In SpikeInterface/spikeinterface;

· by h-mayorquin was closed on Jul 12, 2024

Update nwbextractors.py

extractorsRelated to extractors moduleRelated to extractors module

Status: Merged (completed).

SpikeInterface/spikeinterfacenumber 3179

#3179 In SpikeInterface/spikeinterface;

· by bendichter was closed on Jul 15, 2024

Add explainer of compute always computing in the analyzer (vs WaveformExtractor behavior)

documentationImprovements or additions to documentationImprovements or additions to documentation

Status: Merged (completed).

SpikeInterface/spikeinterfacenumber 3173

#3173 In SpikeInterface/spikeinterface;

· by zm711 was closed on Jul 12, 2024

Saving provenance with paths relative to folder

coreChanges to core moduleChanges to core module

Status: Merged (completed).

SpikeInterface/spikeinterfacenumber 3165

#3165 In SpikeInterface/spikeinterface;

· by h-mayorquin was closed on Jul 11, 2024

Improved conditions for closing nwb when using hdf5 backend

extractorsRelated to extractors moduleRelated to extractors module

Status: Merged (completed).

SpikeInterface/spikeinterfacenumber 3150

#3150 In SpikeInterface/spikeinterface;

· by h-mayorquin was closed on Jul 8, 2024

More explicit consistency checks for Channel aggregation

coreChanges to core moduleChanges to core module

Status: Merged (completed).

SpikeInterface/spikeinterfacenumber 3151

#3151 In SpikeInterface/spikeinterface;

· by h-mayorquin was closed on Jul 5, 2024

Units aggregation preserve unit ids of aggregated sorters

coreChanges to core moduleChanges to core module

Status: Merged (completed).

SpikeInterface/spikeinterfacenumber 3180

#3180 In SpikeInterface/spikeinterface;

· by h-mayorquin was closed on Jul 12, 2024

Convert doc references from wf_extractor -> sorting_analyzer

documentationImprovements or additions to documentationImprovements or additions to documentation

Status: Merged (completed).

SpikeInterface/spikeinterfacenumber 3185

#3185 In SpikeInterface/spikeinterface;

· by zm711 was closed on Jul 12, 2024

Regularize whitening

hackathon-24Contributions during the SpikeInterface Hackathon May 24Contributions during the SpikeInterface Hackathon May 24

preprocessingRelated to preprocessing moduleRelated to preprocessing module

Status: Merged (completed).

SpikeInterface/spikeinterfacenumber 2744

#2744 In SpikeInterface/spikeinterface;

· by yger was closed on Jul 5, 2024

Add name as an extractor attribute for __repr__ purposes

coreChanges to core moduleChanges to core module

Status: Merged (completed).

SpikeInterface/spikeinterfacenumber 2784

#2784 In SpikeInterface/spikeinterface;

· by h-mayorquin was closed on Jul 9, 2024

Optimize numba cross-correlation and extend correlograms.py docstrings and tests

postprocessingRelated to postprocessing moduleRelated to postprocessing module

Status: Merged (completed).

SpikeInterface/spikeinterfacenumber 3017

#3017 In SpikeInterface/spikeinterface;

· by JoeZiminski was closed on Jul 3, 2024