Research compendium for “Imposed form in the Early Acheulean? Evidence from Gona, Afar, Ethiopia”, Journal of Archaeological Method and Theory.
Please open the Rproj file instead of the Rcode directly to make sure relative paths work!
The repository is organized into four main directories: code, data, figure, and manuscript.
Visualization... This is the R script generating the main figures (fig. 4-7) of this paper using data derived from SPSS.
3D-cleaned-for-Cheng-080224... This csv files include the comparative data of both caliper measurement and 3d measurement for method validation.Data_dictionary... This files explains the meaning of variables and how they were measured/calculated.Gona_EA_for_Cheng_020824... This csv file is the main data file recording all relevant attributes analyzed in the paper.
Fig.1.jpg... This is Fig.1 in the manuscript.Fig.2.png... This is Fig.2 in the manuscript.Fig.3.png... This is Fig.3 in the manuscript.Fig.4.png... This is Fig.4 in the manuscript.Fig.5.png... This is Fig.5 in the manuscript.Fig.6.png... This is Fig.6 in the manuscript.Fig.7.png... This is Fig.7 in the manuscript.FAI_SDI.drawio... This is the raw file generating Fig.1.Figures.pptx... This is the raw file generating Picture1-4.Picture1.png... This is generated through Microsoft PowerPoint and integrated in Fig.7.Picture2.png... This is generated through Microsoft PowerPoint and integrated in Fig.7.Picture3.png... This is generated through Microsoft PowerPoint and integrated in Fig.7.Picture4.png... This is generated through Microsoft PowerPoint and integrated in Fig.7.
jhe.csl... This is the JHE citation styleguide.bibliography.bib... This is the reference file.manuscript.pdf... This is the pdf file of the manuscript.manuscript.Rmd... This is the RMarkdown file of the manuscript.manuscript_word.docx... This is the word file of the manuscript.manuscript_word.Rmd... This is the RMarkdown file of the word version of the manuscript.
The code has been successfully executed on on CL's PC with the following R settings.
- CL's R setting
R version 4.4.0 (2024-04-24 ucrt)
Platform: x86_64-w64-mingw32/x64
Running under: Windows 11 x64 (build 22631)
Matrix products: default
locale:
[1] LC_COLLATE=English_United States.utf8 LC_CTYPE=English_United States.utf8
[3] LC_MONETARY=English_United States.utf8 LC_NUMERIC=C
[5] LC_TIME=English_United States.utf8
time zone: Asia/Shanghai
tzcode source: internal
attached base packages:
[1] stats graphics grDevices utils datasets methods base
loaded via a namespace (and not attached):
[1] tidyselect_1.2.1 psych_2.4.6.26 dplyr_1.1.4 fastmap_1.1.1
[5] MVN_5.9 bayestestR_0.14.0 promises_1.3.0 digest_0.6.35
[9] estimability_1.5.1 mime_0.12 lifecycle_1.0.4 magrittr_2.0.3
[13] compiler_4.4.0 rlang_1.1.3 tools_4.4.0 utf8_1.2.4
[17] yaml_2.3.8 knitr_1.46 mnormt_2.1.1 here_1.0.1
[21] abind_1.4-5 miniUI_0.1.1.1 purrr_1.0.2 grid_4.4.0
[25] datawizard_0.12.2 fansi_1.0.6 xtable_1.8-4 colorspace_2.1-0
[29] ggplot2_3.5.1 emmeans_1.10.3 scales_1.3.0 MASS_7.3-60.2
[33] insight_0.20.2 cli_3.6.2 mvtnorm_1.2-5 rmarkdown_2.26
[37] generics_0.1.3 rstudioapi_0.16.0 tzdb_0.4.0 parameters_0.22.1
[41] pbapply_1.7-2 energy_1.7-11 stringr_1.5.1 parallel_4.4.0
[45] effectsize_0.8.9 BayesFactor_0.9.12-4.7 vctrs_0.6.5 boot_1.3-30
[49] Matrix_1.7-0 carData_3.0-5 car_3.1-2 hms_1.1.3
[53] nortest_1.0-4 tidyr_1.3.1 glue_1.7.0 cowplot_1.1.3
[57] stringi_1.8.4 gtable_0.3.5 later_1.3.2 lmtest_0.9-40
[61] gsl_2.1-8 munsell_0.5.1 tibble_3.2.1 pillar_1.9.0
[65] htmltools_0.5.8.1 ggExtra_0.10.1 R6_2.5.1 rprojroot_2.0.4
[69] evaluate_0.23 shiny_1.8.1.1 lattice_0.22-6 readr_2.1.5
[73] png_0.1-8 moments_0.14.1 DFA.CANCOR_0.2.8 httpuv_1.6.15
[77] MatrixModels_0.5-3 Rcpp_1.0.12 coda_0.19-4.1 nlme_3.1-164
[81] xfun_0.43 zoo_1.8-12 pkgconfig_2.0.3
Please contact raylc1996@outlook.com if you have any questions related to the code or data.