Feature added: Get WSI at mpp#7574

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NikolasSchmitz wants to merge 81 commits intoProject-MONAI:devfrom

NikolasSchmitz:4980-get-wsi-at-mpp

Commits on Mar 22, 2024

Added function get_img_at_mpp to class OpenSlideWSIReader of module wsi_reader.py
Nikolas Schmitz
committed
Added get_img_at_mpp to class CuCIMWSIReader
Nikolas Schmitz
committed

Commits on Mar 24, 2024

Added function get_img_at_mpp to class TifffileWSIReader; changed resizing function to Image.resize, cucim.skimage.transform.resize
Nikolas Schmitz
committed
Small changes
Nikolas Schmitz
committed
Small changes
Nikolas Schmitz
committed

Commits on Mar 27, 2024

Stein's Unbiased Risk Estimator (SURE) loss and Conjugate Gradient (#7308)

authored and
NikolasSchmitz
committed
Renamed function to get_wsi_at_mpp

Nikolas Schmitz
authored and
NikolasSchmitz
committed
[pre-commit.ci] auto fixes from pre-commit.com hooks

pre-commit-ci[bot]
authored and
NikolasSchmitz
committed
Reformatted wsi_reader.py
NikolasSchmitz
committed
auto updates (#7577)

monai-bot
authored and
NikolasSchmitz
committed
Fixed return type
NikolasSchmitz
committed
Small fixes
NikolasSchmitz
committed
Remove nested error propagation on `ConfigComponent` instantiate (#7569)

authored and
NikolasSchmitz
committed
2872 implementation of mixup, cutmix and cutout (#7198)

authored and
NikolasSchmitz
committed

Commits on Apr 9, 2024

Merge branch 'dev' into 4980-get-wsi-at-mpp
bhashemian
authored

Commits on Jul 31, 2024

Commits on Aug 2, 2024

Commits on Aug 7, 2024

Merge branch 'dev' into 4980-get-wsi-at-mpp
ericspod
authored

Commits on Aug 11, 2024

Commits on Aug 14, 2024

Merge branch 'Project-MONAI:dev' into 4980-get-wsi-at-mpp
NikolasSchmitz
authored

Commits on Aug 27, 2024

Merge branch 'Project-MONAI:dev' into 4980-get-wsi-at-mpp
NikolasSchmitz
authored

Commits on Sep 10, 2024

Merge branch 'Project-MONAI:dev' into 4980-get-wsi-at-mpp
NikolasSchmitz
authored

Commits on Sep 16, 2024

Merge branch 'Project-MONAI:dev' into 4980-get-wsi-at-mpp
NikolasSchmitz
authored

Commits on Sep 21, 2024

Merge branch 'Project-MONAI:dev' into 4980-get-wsi-at-mpp
NikolasSchmitz
authored

Commits on Nov 17, 2024

Merge branch 'Project-MONAI:dev' into 4980-get-wsi-at-mpp
NikolasSchmitz
authored

Commits on Dec 3, 2024

Merge branch 'Project-MONAI:dev' into 4980-get-wsi-at-mpp
NikolasSchmitz
authored

Commits on Jan 8, 2025

Merge branch 'Project-MONAI:dev' into 4980-get-wsi-at-mpp
NikolasSchmitz
authored

Commits on Mar 5, 2025

Merge branch 'Project-MONAI:dev' into 4980-get-wsi-at-mpp
NikolasSchmitz
authored

Commits on Mar 27, 2025

Merge branch 'Project-MONAI:dev' into 4980-get-wsi-at-mpp
NikolasSchmitz
authored

Commits on Apr 4, 2025

Merge branch 'Project-MONAI:dev' into 4980-get-wsi-at-mpp
NikolasSchmitz
authored

Commits on May 7, 2025

Merge branch 'Project-MONAI:dev' into 4980-get-wsi-at-mpp
NikolasSchmitz
authored

Commits on May 8, 2025

Merge branch 'dev' into 4980-get-wsi-at-mpp
bhashemian
authored

Commits on Jun 25, 2025

Merge branch 'Project-MONAI:dev' into 4980-get-wsi-at-mpp
NikolasSchmitz
authored

Commits on Jul 11, 2025

Merge branch 'Project-MONAI:dev' into 4980-get-wsi-at-mpp
NikolasSchmitz
authored

Commits on Jul 17, 2025

Added get_wsi_at_mpp tests; fixed a few bugs
NikolasSchmitz
committed
Added function get_img_at_mpp to class OpenSlideWSIReader of module wsi_reader.py

Nikolas Schmitz
authored and
NikolasSchmitz
committed
Added get_img_at_mpp to class CuCIMWSIReader

Nikolas Schmitz
authored and
NikolasSchmitz
committed
Added function get_img_at_mpp to class TifffileWSIReader; changed resizing function to Image.resize, cucim.skimage.transform.resize

Nikolas Schmitz
authored and
NikolasSchmitz
committed
Small changes

Nikolas Schmitz
authored and
NikolasSchmitz
committed
Small changes

Nikolas Schmitz
authored and
NikolasSchmitz
committed
Stein's Unbiased Risk Estimator (SURE) loss and Conjugate Gradient (#7308)

authored and
NikolasSchmitz
committed
Renamed function to get_wsi_at_mpp

Nikolas Schmitz
authored and
NikolasSchmitz
committed
[pre-commit.ci] auto fixes from pre-commit.com hooks

pre-commit-ci[bot]
authored and
NikolasSchmitz
committed
Reformatted wsi_reader.py
NikolasSchmitz
committed
auto updates (#7577)

monai-bot
authored and
NikolasSchmitz
committed
Fixed return type
NikolasSchmitz
committed
Small fixes
NikolasSchmitz
committed
Updated function get_wsi_at_mpp; added function _resize_to_mpp_res to reduce redundancy; for get_mpp of TiffFileWSIReader: added check to prevent division by zero error.
NikolasSchmitz
committed
Minor fixes: removed unnecessary comments
NikolasSchmitz
committed
[pre-commit.ci] auto fixes from pre-commit.com hooks

pre-commit-ci[bot]
authored and
NikolasSchmitz
committed
Added new feature and merged updates from main repository
NikolasSchmitz
committed
[pre-commit.ci] auto fixes from pre-commit.com hooks

pre-commit-ci[bot]
authored and
NikolasSchmitz
committed
Added a function _compute_mpp_tolerances which checks the mpp tolerances to BaseWSIReader; Edited docstrings
NikolasSchmitz
committed
[pre-commit.ci] auto fixes from pre-commit.com hooks

pre-commit-ci[bot]
authored and
NikolasSchmitz
committed
Updated WSI reader
NikolasSchmitz
committed
[pre-commit.ci] auto fixes from pre-commit.com hooks

pre-commit-ci[bot]
authored and
NikolasSchmitz
committed
Added get_wsi_at_mpp tests; fixed a few bugs
NikolasSchmitz
committed
Added get_wsi_at_mpp tests; fixed a few bugs
NikolasSchmitz
committed

Commits on Jul 24, 2025

Merge branch 'dev' into 4980-get-wsi-at-mpp
NikolasSchmitz
authored

Commits on Jul 25, 2025

Commits on Aug 26, 2025

Merge branch 'Project-MONAI:dev' into 4980-get-wsi-at-mpp
NikolasSchmitz
authored

Commits on Sep 3, 2025

Merge branch 'dev' into 4980-get-wsi-at-mpp
bhashemian
authored

Commits on Oct 21, 2025

Merge branch 'dev' into 4980-get-wsi-at-mpp
bhashemian
authored