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Merged
vitenti merged 1 commit into from
Aug 2, 2025
Merged

Simplify workflows #538

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164 changes: 24 additions & 140 deletions .github/workflows/ci.yml
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Original file line number Diff line number Diff line change
@@ -1,21 +1,16 @@
name: firecrown-ci


on:
push:
branches:
- 'master'

pull_request:
branches:
- '*'

schedule:
- cron: '47 1 * * *'

jobs:
firecrown-miniforge:
name: Firecrown (${{ matrix.os }}, python-${{ matrix.python-version }}, Miniforge)
name: (${{ matrix.os }}, python-${{ matrix.python-version }})
runs-on: ${{ matrix.os }}-latest
strategy:
fail-fast: false
Expand All @@ -33,7 +28,6 @@ jobs:
conda-remove-defaults: true
environment-file: environment.yml
activate-environment: firecrown_developer

- name: Cache date
id: get-date
run: echo "today=$(/bin/date -u '+%Y%m%d')" >> $GITHUB_OUTPUT
Expand All @@ -44,7 +38,7 @@ jobs:
path: ${{ env.CONDA }}/envs
key: miniforge-${{ runner.os }}--${{ runner.arch }}--python-${{ matrix.python-version }}--${{ steps.get-date.outputs.today }}-${{ hashFiles('environment.yml') }}-${{ env.CACHE_NUMBER }}
env:
CACHE_NUMBER: 1
CACHE_NUMBER: 0
id: cache
- name: Setting up Firecrown
shell: bash -l {0}
Expand Down Expand Up @@ -95,7 +89,7 @@ jobs:
pylint pylint_plugins
pylint --rcfile tests/pylintrc tests
pylint --rcfile examples/pylintrc examples
- name: Running unit tests
- name: Run unit tests with code coverage
shell: bash -l {0}
run: python -m pytest -vv --runslow --cov firecrown --cov-report xml --cov-branch
- name: Running integration tests
Expand All @@ -110,8 +104,8 @@ jobs:
use_oidc: false
env:
CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
test-smokescreen:
name: Firecrown Smokescreen (${{ matrix.os }}, python-${{ matrix.python-version }}, Miniforge)
other_checks:
name: Other checks (${{ matrix.os }}, python-${{ matrix.python-version }})
runs-on: ${{ matrix.os }}-latest
strategy:
fail-fast: false
Expand All @@ -120,12 +114,6 @@ jobs:
python-version: ["3.13"]
steps:
- uses: actions/checkout@v4
- name: Cloning Smokescreen
uses: actions/checkout@v4
with:
repository: 'lsstdesc/smokescreen'
path: 'smokescreen'
ref: 'v1.5.0'
- name: Setting up Miniforge
uses: conda-incubator/setup-miniconda@v3
with:
Expand All @@ -145,17 +133,17 @@ jobs:
path: ${{ env.CONDA }}/envs
key: miniforge-${{ runner.os }}--${{ runner.arch }}--python-${{ matrix.python-version }}--${{ steps.get-date.outputs.today }}-${{ hashFiles('environment.yml') }}-${{ env.CACHE_NUMBER }}
env:
CACHE_NUMBER: 1
CACHE_NUMBER: 0
id: cache
- name: Setting up Firecrown
- name: Create firecrown_developer environment
shell: bash -l {0}
run: |
export FIRECROWN_DIR=${PWD}
conda env config vars set FIRECROWN_DIR=${FIRECROWN_DIR}
conda activate firecrown_developer
pip install --no-deps -e .
conda list
- name: Setting up CosmoSIS
- name: Build and install CosmoSIS Standard Library
shell: bash -l {0}
run: |
source ${CONDA_PREFIX}/bin/cosmosis-configure
Expand All @@ -165,142 +153,38 @@ jobs:
conda env config vars set CSL_DIR=${CSL_DIR}
conda activate firecrown_developer
if: steps.cache.outputs.cache-hit != 'true'
- name: Setting up Cobaya
- name: Install Cobaya
shell: bash -l {0}
run: python -m pip install cobaya
if: steps.cache.outputs.cache-hit != 'true'
- name: Install Smokescreen and test it
shell: bash -l {0}
run: |
cd smokescreen
pip install -e .
python -m pytest tests/

test-augur:
name: Firecrown Augur (${{ matrix.os }}, python-${{ matrix.python-version }}, Miniforge)
runs-on: ${{ matrix.os }}-latest
strategy:
fail-fast: false
matrix:
os: ["macos"]
python-version: ["3.13"]
steps:
- uses: actions/checkout@v4
- name: Cloning Smokescreen
uses: actions/checkout@v4
with:
repository: 'lsstdesc/smokescreen'
path: 'smokescreen'
ref: 'v1.5.0'
- name: Cloning Augur
uses: actions/checkout@v4
with:
repository: 'lsstdesc/augur'
path: 'augur'
ref: '1.1.0'
- name: Setting up Miniforge
uses: conda-incubator/setup-miniconda@v3
with:
miniforge-version: latest
python-version: ${{ matrix.python-version }}
show-channel-urls: true
conda-remove-defaults: true
environment-file: environment.yml
activate-environment: firecrown_developer
- name: Cache date
id: get-date
run: echo "today=$(/bin/date -u '+%Y%m%d')" >> $GITHUB_OUTPUT
shell: bash
- name: Cache Conda env
uses: actions/cache@v4
with:
path: ${{ env.CONDA }}/envs
key: miniforge-${{ runner.os }}--${{ runner.arch }}--python-${{ matrix.python-version }}--${{ steps.get-date.outputs.today }}-${{ hashFiles('environment.yml') }}-${{ env.CACHE_NUMBER }}
env:
CACHE_NUMBER: 1
id: cache
- name: Setting up Firecrown
- name: Build tutorials and documentation and check links
shell: bash -l {0}
run: |
export FIRECROWN_DIR=${PWD}
conda env config vars set FIRECROWN_DIR=${FIRECROWN_DIR}
conda activate firecrown_developer
pip install --no-deps -e .
conda list
- name: Setting up CosmoSIS
shell: bash -l {0}
run: |
source ${CONDA_PREFIX}/bin/cosmosis-configure
pushd ${CONDA_PREFIX}
cosmosis-build-standard-library
export CSL_DIR=${PWD}/cosmosis-standard-library
conda env config vars set CSL_DIR=${CSL_DIR}
conda activate firecrown_developer
if: steps.cache.outputs.cache-hit != 'true'
- name: Setting up Cobaya
shell: bash -l {0}
run: python -m pip install cobaya
if: steps.cache.outputs.cache-hit != 'true'
- name: Install Augurand test it
quarto render tutorial --output-dir=../docs/_static
make -C docs html
linkchecker -f linkcheckerrc docs/_build/html
- name: Pip-install Augur and test it
shell: bash -l {0}
run: |
conda install jinja2 tjpcov
cd augur
pip install -e .
python -m pytest .


firecrown-doccheck:
name: Firecrown Doc check (${{ matrix.os }}, python-${{ matrix.python-version }}, Miniforge)
runs-on: ${{ matrix.os }}-latest
strategy:
fail-fast: false
matrix:
os: ["macos"]
python-version: ["3.13"]
steps:
- uses: actions/checkout@v4
- name: Setting up Miniforge
uses: conda-incubator/setup-miniconda@v3
with:
miniforge-version: latest
python-version: ${{ matrix.python-version }}
show-channel-urls: true
conda-remove-defaults: true
environment-file: environment.yml
activate-environment: firecrown_developer
- name: Cache date
id: get-date
run: echo "today=$(/bin/date -u '+%Y%m%d')" >> $GITHUB_OUTPUT
shell: bash
- name: Cache Conda env
uses: actions/cache@v4
with:
path: ${{ env.CONDA }}/envs
key: miniforge-${{ runner.os }}--${{ runner.arch }}--python-${{ matrix.python-version }}--${{ steps.get-date.outputs.today }}-${{ hashFiles('environment.yml') }}-${{ env.CACHE_NUMBER }}
env:
CACHE_NUMBER: 1
id: cache
- name: Setting up Firecrown
shell: bash -l {0}
run: |
export FIRECROWN_DIR=${PWD}
conda env config vars set FIRECROWN_DIR=${FIRECROWN_DIR}
conda activate firecrown_developer
pip install --no-deps -e .
conda list
- name: Setting up CosmoSIS
- name: Pip-install Smokescreen and test it
shell: bash -l {0}
run: |
source ${CONDA_PREFIX}/bin/cosmosis-configure
pushd ${CONDA_PREFIX}
cosmosis-build-standard-library
export CSL_DIR=${PWD}/cosmosis-standard-library
conda env config vars set CSL_DIR=${CSL_DIR}
conda activate firecrown_developer
if: steps.cache.outputs.cache-hit != 'true'
- name: Setting up Cobaya
shell: bash -l {0}
run: python -m pip install cobaya
if: steps.cache.outputs.cache-hit != 'true'
- name: Testing documentation build
shell: bash -l {0}
run: |
quarto render tutorial --output-dir=../docs/_static
make -C docs html
linkchecker -f linkcheckerrc docs/_build/html

cd smokescreen
pip install -e .
python -m pytest tests
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