lobster/.gitignore at main · prescient-design/lobster · GitHub

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*.egg
*.egg-info
*.egg-info/
*.py[cod]
*.so
*.parquet
*.npy
*~
.cache
.hypothesis
.idea
.tox
.vs
.vscode
.DS_Store
/dist
__pycache__
_skbuild
build
cmake-build-debug
docs/_build
*.err
*.out
*.csv
scripts/*
scripts/*.fasta
scripts/fastas/*.fasta
scripts/combined_db*
*_play.py
src/lobster/hydra_config/experiment/*
src/lobster/mcp/claude_desktop_config.json

notebooks/nathan/*
notebooks/karina/*
*.ipynb

models/*

dev
outputs
wandb
lightning_logs

.env
dev

*.ckpt

# DGEB evaluation results and test reports
*.log
dgeb_results/
dgeb_test_results/
dgeb_mock_results/
*_dgeb_eval/
evaluation_report.md
results_summary.json

# DXT extensions (large binary files)
test_dxt/*
*.dxt
# Databases and macOS artifacts
*.lmdb/
*.mdb
._*

# UME HF model
src/lobster/model/integrations/ume_huggingface/model/*

*.sh