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1 parent 6148983 commit 2963c38Copy full SHA for 2963c38
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.github/workflows/sync.yml
@@ -111,6 +111,8 @@ jobs:
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run: |
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git config --global user.email "core@nf-co.re"
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git config --global user.name "nf-core-bot"
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+ setBranch=$(git config --global init.defaultBranch)
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+ echo "set default branch: $defaultBranch" >> GITHUB_OUTPUT
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nf-core --log-file sync_log_${{ matrix.pipeline }}.txt \
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${{ github.event.inputs.debug == 'true' && '--verbose' || '' }} \
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pipelines sync -d nf-core/${{ matrix.pipeline }} \
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