From f3978e8f92a81c4edc3334fe867ab1296edd6143 Mon Sep 17 00:00:00 2001 From: Angel Pizarro Date: Thu, 20 Mar 2025 14:48:07 -0400 Subject: [PATCH 1/2] Addresses issue #1520. updated the conda packge version specifcation for Perl for the local module gtf2bed --- modules/local/gtf2bed/environment.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/modules/local/gtf2bed/environment.yml b/modules/local/gtf2bed/environment.yml index 99d32b942..a5d6e3dff 100644 --- a/modules/local/gtf2bed/environment.yml +++ b/modules/local/gtf2bed/environment.yml @@ -2,4 +2,4 @@ channels: - conda-forge - bioconda dependencies: - - conda-forge::perl=5.26.2 + - conda-forge::perl>=5.26.2 From 1b01971b52f6bdcb34e879064c6b4fcae0eb7236 Mon Sep 17 00:00:00 2001 From: Angel Pizarro Date: Fri, 21 Mar 2025 12:06:24 -0400 Subject: [PATCH 2/2] updated the CHANGELOG.md with the PR --- CHANGELOG.md | 1 + 1 file changed, 1 insertion(+) diff --git a/CHANGELOG.md b/CHANGELOG.md index 9e4dde0e3..510b01eef 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -16,6 +16,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0 - [PR #1496](https://github.com/nf-core/rnaseq/pull/1496) - Template update for nf-core/tools v3.2.0 - [PR #1499](https://github.com/nf-core/rnaseq/pull/1499) - Bump MultiQC module to 1.27 - [PR #1508](https://github.com/nf-core/rnaseq/pull/1508) - Fix missing Bracken results in the MultiQC report +- [PR #1521](https://github.com/nf-core/rnaseq/pull/1521) - Updated Perl conda package version for local module gtf2bed for Arm compatibility. # 3.18.0 - 2024-12-19