diff --git a/subworkflows/nf-core/bam_impute_quilt/tests/nextflow.config b/subworkflows/nf-core/bam_impute_quilt/tests/nextflow.config index 7ab7994735f9..b074c3b5a26b 100644 --- a/subworkflows/nf-core/bam_impute_quilt/tests/nextflow.config +++ b/subworkflows/nf-core/bam_impute_quilt/tests/nextflow.config @@ -3,17 +3,14 @@ process { cpus = 1 // needed for deterministic output ext.args = { "${params.quilt_args}" } ext.prefix = { "${meta.id}_${meta.chr}_${meta.regionout}.quilt" } - tag = { "${meta.id} ${meta.chr} ${meta.regionout}" } } withName: GLIMPSE2_LIGATE { ext.prefix = { "${meta.id}_${meta.chr}.ligate" } - tag = { "${meta.id} ${meta.chr}" } } withName: BCFTOOLS_INDEX { ext.args = '--csi' - tag = { "${meta.id} ${meta.chr}" } publishDir = [enabled: false] } } diff --git a/subworkflows/nf-core/bam_vcf_impute_glimpse2/tests/nextflow.config b/subworkflows/nf-core/bam_vcf_impute_glimpse2/tests/nextflow.config index 7aea8a877175..8ed0fd672ab7 100644 --- a/subworkflows/nf-core/bam_vcf_impute_glimpse2/tests/nextflow.config +++ b/subworkflows/nf-core/bam_vcf_impute_glimpse2/tests/nextflow.config @@ -1,7 +1,6 @@ process { withName: GLIMPSE2_CHUNK { ext.prefix = { "${meta.panel}_${meta.chr}" } - tag = { "${meta.panel} ${meta.chr}}" } ext.args = [ "--window-mb 0.01", "--window-cm 0.01", @@ -15,27 +14,16 @@ process { withName: GLIMPSE2_SPLITREFERENCE { ext.prefix = { "${meta.panel}_${meta.chr}_${meta.regionout}" } - tag = { "${meta.panel} ${meta.chr} ${meta.regionout}" } ext.args = "--seed 1" } withName: GLIMPSE2_PHASE { ext.prefix = { "${meta.id}_${meta.chr}_${meta.regionout}" } - tag = { "${meta.id} ${meta.chr} ${meta.regionout}" } cpus = 1 // needed for deterministic output ext.args = "--keep-monomorphic-ref-sites --seed 1" } - withName: BCFTOOLS_INDEX_PHASE { - tag = { "${meta.id} ${meta.chr} ${meta.regionout}" } - } - withName: GLIMPSE2_LIGATE { ext.prefix = { "${meta.id}_${meta.chr}" } - tag = { "${meta.id} ${meta.chr}" } - } - - withName: BCFTOOLS_INDEX_LIGATE { - tag = { "${meta.id} ${meta.chr}" } } }