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[SPARK-52844][PYTHON] Update protobuf Python package to 5.29.5 #51747

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[SPARK-52844][PYTHON] Update protobuf Python package to 5.29.5 #51747

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4 changes: 2 additions & 2 deletions .github/workflows/build_and_test.yml
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Expand Up @@ -362,7 +362,7 @@ jobs:
- name: Install Python packages (Python 3.11)
if: (contains(matrix.modules, 'sql') && !contains(matrix.modules, 'sql-')) || contains(matrix.modules, 'connect') || contains(matrix.modules, 'yarn')
run: |
python3.11 -m pip install 'numpy>=1.22' pyarrow pandas pyyaml scipy unittest-xml-reporting 'lxml==4.9.4' 'grpcio==1.67.0' 'grpcio-status==1.67.0' 'protobuf==5.29.1'
python3.11 -m pip install 'numpy>=1.22' pyarrow pandas pyyaml scipy unittest-xml-reporting 'lxml==4.9.4' 'grpcio==1.67.0' 'grpcio-status==1.67.0' 'protobuf==5.29.5'
python3.11 -m pip list
# Run the tests.
- name: Run tests
Expand Down Expand Up @@ -766,7 +766,7 @@ jobs:
python-version: '3.11'
- name: Install dependencies for Python CodeGen check
run: |
python3.11 -m pip install 'black==23.12.1' 'protobuf==5.29.1' 'mypy==1.8.0' 'mypy-protobuf==3.3.0'
python3.11 -m pip install 'black==23.12.1' 'protobuf==5.29.5' 'mypy==1.8.0' 'mypy-protobuf==3.3.0'
python3.11 -m pip list
- name: Python CodeGen check for branch-3.5
if: inputs.branch == 'branch-3.5'
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2 changes: 1 addition & 1 deletion .github/workflows/build_python_connect.yml
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Expand Up @@ -72,7 +72,7 @@ jobs:
python packaging/client/setup.py sdist
cd dist
pip install pyspark*client-*.tar.gz
pip install 'grpcio==1.67.0' 'grpcio-status==1.67.0' 'protobuf==5.29.1' 'googleapis-common-protos==1.65.0' 'graphviz==0.20.3' 'six==1.16.0' 'pandas==2.3.2' scipy 'plotly<6.0.0' 'mlflow>=2.8.1' coverage matplotlib openpyxl 'memory-profiler>=0.61.0' 'scikit-learn>=1.3.2' 'graphviz==0.20.3' 'torch<2.6.0' torchvision torcheval deepspeed unittest-xml-reporting
pip install 'grpcio==1.67.0' 'grpcio-status==1.67.0' 'protobuf==5.29.5' 'googleapis-common-protos==1.65.0' 'graphviz==0.20.3' 'six==1.16.0' 'pandas==2.3.2' scipy 'plotly<6.0.0' 'mlflow>=2.8.1' coverage matplotlib openpyxl 'memory-profiler>=0.61.0' 'scikit-learn>=1.3.2' 'graphviz==0.20.3' 'torch<2.6.0' torchvision torcheval deepspeed unittest-xml-reporting
- name: List Python packages
run: python -m pip list
- name: Run tests (local)
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2 changes: 1 addition & 1 deletion .github/workflows/build_python_connect35.yml
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Expand Up @@ -71,7 +71,7 @@ jobs:
pip install 'numpy==1.25.1' 'pyarrow>=18.0.0' 'pandas<=2.0.3' scipy unittest-xml-reporting 'plotly<6.0.0' 'mlflow>=2.3.1' coverage 'matplotlib==3.7.2' openpyxl 'memory-profiler==0.60.0' 'scikit-learn==1.1.*'

# Add Python deps for Spark Connect.
pip install 'grpcio==1.67.0' 'grpcio-status==1.67.0' 'protobuf==5.29.1' 'googleapis-common-protos==1.65.0' 'graphviz==0.20.3'
pip install 'grpcio==1.67.0' 'grpcio-status==1.67.0' 'protobuf==5.29.5' 'googleapis-common-protos==1.65.0' 'graphviz==0.20.3'

# Add torch as a testing dependency for TorchDistributor
pip install 'torch==2.0.1' 'torchvision==0.15.2' torcheval
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2 changes: 1 addition & 1 deletion .github/workflows/maven_test.yml
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Expand Up @@ -175,7 +175,7 @@ jobs:
- name: Install Python packages (Python 3.11)
if: contains(matrix.modules, 'resource-managers#yarn') || (contains(matrix.modules, 'sql#core')) || contains(matrix.modules, 'connect')
run: |
python3.11 -m pip install 'numpy>=1.22' pyarrow pandas scipy unittest-xml-reporting 'grpcio==1.67.0' 'grpcio-status==1.67.0' 'protobuf==5.29.1'
python3.11 -m pip install 'numpy>=1.22' pyarrow pandas scipy unittest-xml-reporting 'grpcio==1.67.0' 'grpcio-status==1.67.0' 'protobuf==5.29.5'
python3.11 -m pip list
# Run the tests using script command.
# BSD's script command doesn't support -c option, and the usage is different from Linux's one.
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2 changes: 1 addition & 1 deletion .github/workflows/pages.yml
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Expand Up @@ -63,7 +63,7 @@ jobs:
pip install 'sphinx==4.5.0' mkdocs 'pydata_sphinx_theme>=0.13' sphinx-copybutton nbsphinx numpydoc jinja2 markupsafe 'pyzmq<24.0.0' \
ipython ipython_genutils sphinx_plotly_directive 'numpy>=1.22' pyarrow 'pandas==2.3.2' 'plotly>=4.8' 'docutils<0.18.0' \
'flake8==3.9.0' 'mypy==1.8.0' 'pytest==7.1.3' 'pytest-mypy-plugins==1.9.3' 'black==23.12.1' \
'pandas-stubs==1.2.0.53' 'grpcio==1.67.0' 'grpcio-status==1.67.0' 'protobuf==5.29.1' 'grpc-stubs==1.24.11' 'googleapis-common-protos-stubs==2.2.0' \
'pandas-stubs==1.2.0.53' 'grpcio==1.67.0' 'grpcio-status==1.67.0' 'protobuf==5.29.5' 'grpc-stubs==1.24.11' 'googleapis-common-protos-stubs==2.2.0' \
'sphinxcontrib-applehelp==1.0.4' 'sphinxcontrib-devhelp==1.0.2' 'sphinxcontrib-htmlhelp==2.0.1' 'sphinxcontrib-qthelp==1.0.3' 'sphinxcontrib-serializinghtml==1.1.5'
- name: Install Ruby for documentation generation
uses: ruby/setup-ruby@v1
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2 changes: 1 addition & 1 deletion .github/workflows/python_hosted_runner_test.yml
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Expand Up @@ -151,7 +151,7 @@ jobs:
python${{matrix.python}} -m pip install --ignore-installed 'blinker>=1.6.2'
python${{matrix.python}} -m pip install --ignore-installed 'six==1.16.0'
python${{matrix.python}} -m pip install numpy 'pyarrow>=21.0.0' 'six==1.16.0' 'pandas==2.3.2' scipy 'plotly<6.0.0' 'mlflow>=2.8.1' coverage matplotlib openpyxl 'memory-profiler>=0.61.0' 'scikit-learn>=1.3.2' unittest-xml-reporting && \
python${{matrix.python}} -m pip install 'grpcio==1.67.0' 'grpcio-status==1.67.0' 'protobuf==5.29.1' 'googleapis-common-protos==1.65.0' 'graphviz==0.20.3' && \
python${{matrix.python}} -m pip install 'grpcio==1.67.0' 'grpcio-status==1.67.0' 'protobuf==5.29.5' 'googleapis-common-protos==1.65.0' 'graphviz==0.20.3' && \
python${{matrix.python}} -m pip cache purge
- name: List Python packages
run: python${{matrix.python}} -m pip list
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2 changes: 1 addition & 1 deletion dev/create-release/spark-rm/Dockerfile
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Expand Up @@ -94,7 +94,7 @@ ENV R_LIBS_SITE="/usr/local/lib/R/site-library:${R_LIBS_SITE}:/usr/lib/R/library

ARG BASIC_PIP_PKGS="numpy pyarrow>=18.0.0 six==1.16.0 pandas==2.3.2 scipy plotly<6.0.0 mlflow>=2.8.1 coverage matplotlib openpyxl memory-profiler>=0.61.0 scikit-learn>=1.3.2 twine==3.4.1"
# Python deps for Spark Connect
ARG CONNECT_PIP_PKGS="grpcio==1.67.0 grpcio-status==1.67.0 protobuf==5.29.1 googleapis-common-protos==1.65.0 graphviz==0.20.3"
ARG CONNECT_PIP_PKGS="grpcio==1.67.0 grpcio-status==1.67.0 protobuf==5.29.5 googleapis-common-protos==1.65.0 graphviz==0.20.3"

# Install Python 3.10 packages
RUN curl -sS https://bootstrap.pypa.io/get-pip.py | python3.10
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2 changes: 1 addition & 1 deletion dev/infra/Dockerfile
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Expand Up @@ -96,7 +96,7 @@ RUN pypy3 -m pip install numpy 'six==1.16.0' 'pandas==2.3.0' scipy coverage matp

ARG BASIC_PIP_PKGS="numpy pyarrow>=18.0.0 six==1.16.0 pandas==2.3.0 scipy plotly>=4.8 mlflow>=2.8.1 coverage matplotlib openpyxl memory-profiler>=0.61.0 scikit-learn>=1.3.2"
# Python deps for Spark Connect
ARG CONNECT_PIP_PKGS="grpcio==1.67.0 grpcio-status==1.67.0 protobuf==5.29.1 googleapis-common-protos==1.65.0 graphviz==0.20.3"
ARG CONNECT_PIP_PKGS="grpcio==1.67.0 grpcio-status==1.67.0 protobuf==5.29.5 googleapis-common-protos==1.65.0 graphviz==0.20.3"

# Install Python 3.10 packages
RUN curl -sS https://bootstrap.pypa.io/get-pip.py | python3.10
Expand Down
2 changes: 1 addition & 1 deletion dev/requirements.txt
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Expand Up @@ -64,7 +64,7 @@ py
grpcio>=1.67.0
grpcio-status>=1.67.0
googleapis-common-protos>=1.65.0
protobuf==5.29.1
protobuf==5.29.5

# Spark Connect python proto generation plugin (optional)
mypy-protobuf==3.3.0
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2 changes: 1 addition & 1 deletion dev/spark-test-image/docs/Dockerfile
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Expand Up @@ -90,6 +90,6 @@ RUN curl -sS https://bootstrap.pypa.io/get-pip.py | python3.11
RUN python3.11 -m pip install 'sphinx==4.5.0' mkdocs 'pydata_sphinx_theme>=0.13' sphinx-copybutton nbsphinx numpydoc jinja2 markupsafe 'pyzmq<24.0.0' \
ipython ipython_genutils sphinx_plotly_directive 'numpy>=1.22' pyarrow 'pandas==2.3.2' 'plotly>=4.8' 'docutils<0.18.0' \
'flake8==3.9.0' 'mypy==1.8.0' 'pytest==7.1.3' 'pytest-mypy-plugins==1.9.3' 'black==23.12.1' \
'pandas-stubs==1.2.0.53' 'grpcio==1.67.0' 'grpcio-status==1.67.0' 'protobuf==5.29.1' 'grpc-stubs==1.24.11' 'googleapis-common-protos-stubs==2.2.0' \
'pandas-stubs==1.2.0.53' 'grpcio==1.67.0' 'grpcio-status==1.67.0' 'protobuf==5.29.5' 'grpc-stubs==1.24.11' 'googleapis-common-protos-stubs==2.2.0' \
'sphinxcontrib-applehelp==1.0.4' 'sphinxcontrib-devhelp==1.0.2' 'sphinxcontrib-htmlhelp==2.0.1' 'sphinxcontrib-qthelp==1.0.3' 'sphinxcontrib-serializinghtml==1.1.5' \
&& python3.11 -m pip cache purge
2 changes: 1 addition & 1 deletion dev/spark-test-image/numpy-213/Dockerfile
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Expand Up @@ -70,7 +70,7 @@ RUN apt-get update && apt-get install -y \
# Pin numpy==2.1.3
ARG BASIC_PIP_PKGS="numpy==2.1.3 pyarrow==19.0.0 six==1.16.0 pandas==2.2.3 scipy plotly<6.0.0 mlflow>=2.8.1 coverage matplotlib openpyxl memory-profiler>=0.61.0 scikit-learn>=1.3.2"
# Python deps for Spark Connect
ARG CONNECT_PIP_PKGS="grpcio==1.67.0 grpcio-status==1.67.0 protobuf==5.29.1 googleapis-common-protos==1.65.0 graphviz==0.20.3"
ARG CONNECT_PIP_PKGS="grpcio==1.67.0 grpcio-status==1.67.0 protobuf==5.29.5 googleapis-common-protos==1.65.0 graphviz==0.20.3"

# Install Python 3.11 packages
RUN curl -sS https://bootstrap.pypa.io/get-pip.py | python3.11
Expand Down
2 changes: 1 addition & 1 deletion dev/spark-test-image/python-310/Dockerfile
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Expand Up @@ -65,7 +65,7 @@ RUN apt-get update && apt-get install -y \

ARG BASIC_PIP_PKGS="numpy pyarrow>=21.0.0 six==1.16.0 pandas==2.3.2 scipy plotly<6.0.0 mlflow>=2.8.1 coverage matplotlib openpyxl memory-profiler>=0.61.0 scikit-learn>=1.3.2"
# Python deps for Spark Connect
ARG CONNECT_PIP_PKGS="grpcio==1.67.0 grpcio-status==1.67.0 protobuf==5.29.1 googleapis-common-protos==1.65.0 graphviz==0.20.3"
ARG CONNECT_PIP_PKGS="grpcio==1.67.0 grpcio-status==1.67.0 protobuf==5.29.5 googleapis-common-protos==1.65.0 graphviz==0.20.3"

# Install Python 3.10 packages
RUN curl -sS https://bootstrap.pypa.io/get-pip.py | python3.10
Expand Down
2 changes: 1 addition & 1 deletion dev/spark-test-image/python-311/Dockerfile
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Expand Up @@ -69,7 +69,7 @@ RUN apt-get update && apt-get install -y \

ARG BASIC_PIP_PKGS="numpy pyarrow>=21.0.0 six==1.16.0 pandas==2.3.2 scipy plotly<6.0.0 mlflow>=2.8.1 coverage matplotlib openpyxl memory-profiler>=0.61.0 scikit-learn>=1.3.2"
# Python deps for Spark Connect
ARG CONNECT_PIP_PKGS="grpcio==1.67.0 grpcio-status==1.67.0 protobuf==5.29.1 googleapis-common-protos==1.65.0 graphviz==0.20.3"
ARG CONNECT_PIP_PKGS="grpcio==1.67.0 grpcio-status==1.67.0 protobuf==5.29.5 googleapis-common-protos==1.65.0 graphviz==0.20.3"

# Install Python 3.11 packages
RUN curl -sS https://bootstrap.pypa.io/get-pip.py | python3.11
Expand Down
2 changes: 1 addition & 1 deletion dev/spark-test-image/python-312/Dockerfile
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Expand Up @@ -69,7 +69,7 @@ RUN apt-get update && apt-get install -y \

ARG BASIC_PIP_PKGS="numpy pyarrow>=21.0.0 six==1.16.0 pandas==2.3.2 scipy plotly<6.0.0 mlflow>=2.8.1 coverage matplotlib openpyxl memory-profiler>=0.61.0 scikit-learn>=1.3.2"
# Python deps for Spark Connect
ARG CONNECT_PIP_PKGS="grpcio==1.67.0 grpcio-status==1.67.0 protobuf==5.29.1 googleapis-common-protos==1.65.0 graphviz==0.20.3"
ARG CONNECT_PIP_PKGS="grpcio==1.67.0 grpcio-status==1.67.0 protobuf==5.29.5 googleapis-common-protos==1.65.0 graphviz==0.20.3"

# Install Python 3.12 packages
RUN curl -sS https://bootstrap.pypa.io/get-pip.py | python3.12
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2 changes: 1 addition & 1 deletion dev/spark-test-image/python-313-nogil/Dockerfile
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Expand Up @@ -68,7 +68,7 @@ RUN apt-get update && apt-get install -y \


ARG BASIC_PIP_PKGS="numpy pyarrow>=21.0.0 six==1.16.0 pandas==2.3.2 scipy plotly<6.0.0 mlflow>=2.8.1 coverage matplotlib openpyxl memory-profiler>=0.61.0 scikit-learn>=1.3.2"
ARG CONNECT_PIP_PKGS="grpcio==1.67.0 grpcio-status==1.67.0 protobuf==5.29.1 googleapis-common-protos==1.65.0 graphviz==0.20.3"
ARG CONNECT_PIP_PKGS="grpcio==1.67.0 grpcio-status==1.67.0 protobuf==5.29.5 googleapis-common-protos==1.65.0 graphviz==0.20.3"


# Install Python 3.13 packages
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2 changes: 1 addition & 1 deletion dev/spark-test-image/python-313/Dockerfile
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Expand Up @@ -69,7 +69,7 @@ RUN apt-get update && apt-get install -y \

ARG BASIC_PIP_PKGS="numpy pyarrow>=21.0.0 six==1.16.0 pandas==2.3.2 scipy plotly<6.0.0 mlflow>=2.8.1 coverage matplotlib openpyxl memory-profiler>=0.61.0 scikit-learn>=1.3.2"
# Python deps for Spark Connect
ARG CONNECT_PIP_PKGS="grpcio==1.67.0 grpcio-status==1.67.0 protobuf==5.29.1 googleapis-common-protos==1.65.0 graphviz==0.20.3"
ARG CONNECT_PIP_PKGS="grpcio==1.67.0 grpcio-status==1.67.0 protobuf==5.29.5 googleapis-common-protos==1.65.0 graphviz==0.20.3"

# Install Python 3.13 packages
RUN curl -sS https://bootstrap.pypa.io/get-pip.py | python3.13
Expand Down