HBASE-26210 HBase Write should be doomed to hang when cell size exceeds InmemoryFlushSize for CompactingMemStore (#3604)

Signed-off-by: Duo Zhang <zhangduo@apache.org>

Author: comnetwork

hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/CompactingMemStore.java

@@ -208,7 +208,7 @@ public MemStoreSnapshot snapshot() {
       stopCompaction();
       // region level lock ensures pushing active to pipeline is done in isolation
       // no concurrent update operations trying to flush the active segment
-      pushActiveToPipeline(getActive());
+      pushActiveToPipeline(getActive(), true);
       resetTimeOfOldestEdit();
       snapshotId = EnvironmentEdgeManager.currentTime();
       // in both cases whatever is pushed to snapshot is cleared from the pipeline
@@ -413,33 +413,61 @@ protected List<KeyValueScanner> createList(int capacity) {
   }
 
   /**
-   * Check whether anything need to be done based on the current active set size.
-   * The method is invoked upon every addition to the active set.
-   * For CompactingMemStore, flush the active set to the read-only memory if it's
-   * size is above threshold
+   * Check whether anything need to be done based on the current active set size. The method is
+   * invoked upon every addition to the active set. For CompactingMemStore, flush the active set to
+   * the read-only memory if it's size is above threshold
    * @param currActive intended segment to update
    * @param cellToAdd cell to be added to the segment
    * @param memstoreSizing object to accumulate changed size
-   * @return true if the cell can be added to the
+   * @return true if the cell can be added to the currActive
    */
-  private boolean checkAndAddToActiveSize(MutableSegment currActive, Cell cellToAdd,
+  protected boolean checkAndAddToActiveSize(MutableSegment currActive, Cell cellToAdd,
       MemStoreSizing memstoreSizing) {
-    if (shouldFlushInMemory(currActive, cellToAdd, memstoreSizing)) {
-      if (currActive.setInMemoryFlushed()) {
-        flushInMemory(currActive);
-        if (setInMemoryCompactionFlag()) {
-          // The thread is dispatched to do in-memory compaction in the background
-          InMemoryCompactionRunnable runnable = new InMemoryCompactionRunnable();
-          if (LOG.isTraceEnabled()) {
-            LOG.trace("Dispatching the MemStore in-memory flush for store " + store
-                .getColumnFamilyName());
-          }
-          getPool().execute(runnable);
+    long cellSize = MutableSegment.getCellLength(cellToAdd);
+    boolean successAdd = false;
+    while (true) {
+      long segmentDataSize = currActive.getDataSize();
+      if (!inWalReplay && segmentDataSize > inmemoryFlushSize) {
+        // when replaying edits from WAL there is no need in in-memory flush regardless the size
+        // otherwise size below flush threshold try to update atomically
+        break;
+      }
+      if (currActive.compareAndSetDataSize(segmentDataSize, segmentDataSize + cellSize)) {
+        if (memstoreSizing != null) {
+          memstoreSizing.incMemStoreSize(cellSize, 0, 0, 0);
         }
+        successAdd = true;
+        break;
+      }
+    }
+
+    if (!inWalReplay && currActive.getDataSize() > inmemoryFlushSize) {
+      // size above flush threshold so we flush in memory
+      this.tryFlushInMemoryAndCompactingAsync(currActive);
+    }
+    return successAdd;
+  }
+
+  /**
+   * Try to flush the currActive in memory and submit the background
+   * {@link InMemoryCompactionRunnable} to
+   * {@link RegionServicesForStores#getInMemoryCompactionPool()}. Just one thread can do the actual
+   * flushing in memory.
+   * @param currActive current Active Segment to be flush in memory.
+   */
+  private void tryFlushInMemoryAndCompactingAsync(MutableSegment currActive) {
+    if (currActive.setInMemoryFlushed()) {
+      flushInMemory(currActive);
+      if (setInMemoryCompactionFlag()) {
+        // The thread is dispatched to do in-memory compaction in the background
+        InMemoryCompactionRunnable runnable = new InMemoryCompactionRunnable();
+        if (LOG.isTraceEnabled()) {
+          LOG.trace(
+            "Dispatching the MemStore in-memory flush for store " + store.getColumnFamilyName());
+        }
+        getPool().execute(runnable);
       }
-      return false;
     }
-    return true;
   }
 
   // externally visible only for tests
@@ -497,26 +525,6 @@ private ThreadPoolExecutor getPool() {
     return getRegionServices().getInMemoryCompactionPool();
   }
 
-  protected boolean shouldFlushInMemory(MutableSegment currActive, Cell cellToAdd,
-      MemStoreSizing memstoreSizing) {
-    long cellSize = MutableSegment.getCellLength(cellToAdd);
-    long segmentDataSize = currActive.getDataSize();
-    while (segmentDataSize + cellSize < inmemoryFlushSize || inWalReplay) {
-      // when replaying edits from WAL there is no need in in-memory flush regardless the size
-      // otherwise size below flush threshold try to update atomically
-      if (currActive.compareAndSetDataSize(segmentDataSize, segmentDataSize + cellSize)) {
-        if (memstoreSizing != null) {
-          memstoreSizing.incMemStoreSize(cellSize, 0, 0, 0);
-        }
-        // enough space for cell - no need to flush
-        return false;
-      }
-      segmentDataSize = currActive.getDataSize();
-    }
-    // size above flush threshold
-    return true;
-  }
-
   /**
    * The request to cancel the compaction asynchronous task (caused by in-memory flush)
    * The compaction may still happen if the request was sent too late
@@ -528,10 +536,6 @@ private void stopCompaction() {
     }
   }
 
-  protected void pushActiveToPipeline(MutableSegment currActive) {
-    pushActiveToPipeline(currActive, true);
-  }
-
   /**
    * NOTE: When {@link CompactingMemStore#flushInMemory(MutableSegment)} calls this method, due to
    * concurrent writes and because we first add cell size to currActive.getDataSize and then

hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/CompactionPipeline.java

@@ -229,7 +229,7 @@ public boolean flattenOneSegment(long requesterVersion,
         if ( s.canBeFlattened() ) {
           s.waitForUpdates(); // to ensure all updates preceding s in-memory flush have completed
           if (s.isEmpty()) {
-            // after s.waitForUpdates() is called, there is no updates preceding,if no cells in s,
+            // after s.waitForUpdates() is called, there is no updates pending,if no cells in s,
             // we can skip it.
             continue;
           }

hbase-server/src/test/java/org/apache/hadoop/hbase/regionserver/TestCompactingToCellFlatMapMemStore.java

@@ -823,11 +823,11 @@ public void testFlatteningToJumboCellChunkMap() throws IOException {
 
     // The in-memory flush size is bigger than the size of a single cell,
     // but smaller than the size of two cells.
-    // Therefore, the two created cells are flattened together.
+    // Therefore, the two created cells are flushed together as a single CSLMImmutableSegment and
+    // flattened.
     totalHeapSize = MutableSegment.DEEP_OVERHEAD
         + CellChunkImmutableSegment.DEEP_OVERHEAD_CCM
-        + 1 * oneCellOnCSLMHeapSize
-        + 1 * oneCellOnCCMHeapSize;
+        + 2 * oneCellOnCCMHeapSize;
     assertEquals(totalHeapSize, ((CompactingMemStore) memstore).heapSize());
   }