Skip to content

History

New page

Revisions

  • The link (http://simnibs.de/installation/installfsandfsl) is not valid anymore.

    @JAQuent JAQuent committed Sep 11, 2025
    ba10a60

  • Added Python environment requirement

    @jese11 jese11 committed Sep 3, 2025
    4c7606b

  • Updated Installation and Usage Instructions (markdown)

    @jese11 jese11 committed Sep 3, 2025
    1a890c7

  • Updated Installation and Usage Instructions (markdown)

    @glasserm glasserm committed Apr 9, 2025
    26986f6

  • Updated Installation and Usage Instructions (markdown)

    @glasserm glasserm committed Apr 2, 2025
    aa707ed

  • update MCR version

    @coalsont coalsont committed Nov 19, 2024
    7778eda

  • Revert 6046e6648b9adce7f5274ed2f5ba6840524c0d26...4bddb5f058454f02bc78af7a21f50e1a04a3a5e9 on Installation and Usage Instructions

    @zhitao-guo zhitao-guo committed Oct 16, 2023
    4fc6d6f

  • Updated Installation and Usage Instructions (markdown)

    @zhitao-guo zhitao-guo committed Oct 16, 2023
    4bddb5f

  • don't specifically recommend 6.0.5, which inappropriately copies nifti header extensions from reference space files

    @coalsont coalsont committed Apr 10, 2023
    6046e66

  • Highlighted lack of support for FS 7.X

    @jese11 jese11 committed Feb 7, 2023
    b0d6e8e

  • Spelled out temporal ICA

    @jese11 jese11 committed Nov 23, 2022
    81d5271

  • Updating "I still have questions"

    @jese11 jese11 committed Nov 22, 2022
    ab34810

  • Updated Subjlist, Queue instructions, instructions for modifying fMRINames and ConcatNames in IcaFixProcessingBatch.sh

    @jese11 jese11 committed Nov 16, 2022
    6decff0

  • Detail on as distributed settings of ICA+FIX

    @jese11 jese11 committed Nov 11, 2022
    3afbca1

  • Clarification that setting MCR correctly is only necessary if compiled MATLAB will be used

    @jese11 jese11 committed Nov 10, 2022
    e77c8bc

  • Changed instructions for setting HCPPIPEDIR, added MATLAB_COMPILER_RUNTIME section

    @jese11 jese11 committed Nov 10, 2022
    a952110

  • Clarification of running jobs locally via fsl_sub, updated Functional preprocessing and Task analysis steps to include all runs as they are in the example scripts, description of MSMAll

    @jese11 jese11 committed Nov 10, 2022
    c897d83

  • Added QUEUE variable, more direct reference to job error file, moved diffusion to end, inserted FIX and MSMAll (new) after functional

    @jese11 jese11 committed Nov 9, 2022
    79dbcb3

  • Fixed wording and typos

    @jese11 jese11 committed Nov 7, 2022
    729d51f

  • Updated Installation and Usage Instructions (markdown)

    @glasserm glasserm committed Nov 5, 2022
    a2b2b56

  • Added sections for setting the directory for MSMBINDIR and FSL_FIXDIR + fixed formatting of PreFreeSurferPipeline.sh.e<process-id>

    @jese11 jese11 committed Oct 28, 2022
    96e0670

  • Updated Installation item 5 to have correct contents from v4.3.0, added link to Ref Man for instructions for signing DUT

    @jese11 jese11 committed Oct 27, 2022
    81eba8f

  • Fixing typos, updated name of pipelines directory from "Pipelines-4.3.0" to "HCPpipelines-4.3.0" as it is named upon download.

    @jese11 jese11 committed Oct 26, 2022
    11fd31b

  • Updated Installation and Usage Instructions (markdown)

    @glasserm glasserm committed Feb 12, 2022
    85fcb07

  • Updated Installation and Usage Instructions (markdown)

    @glasserm glasserm committed Feb 12, 2022
    5b063cb

  • Updated Installation and Usage Instructions (markdown)

    @glasserm glasserm committed Feb 12, 2022
    18373d5

  • remove unused release notes section

    @coalsont coalsont committed Feb 8, 2021
    4593737

  • Updated Installation and Usage Instructions (markdown)

    @glasserm glasserm committed Feb 8, 2021
    65b3dca

  • Updated Installation and Usage Instructions (markdown)

    @jese11 jese11 committed Feb 12, 2020
    98403e3

  • Updated Home (markdown)

    @mharms mharms committed Aug 15, 2019
    2564b21