CHANGELOG.md

Changelog

0.11.2 (2026-03-06)

Bug Fixes

• MultiQC benchmark extension (#44) (5650952)
• sort saturated reads to ensure passes unit testing (#41) (281c27e)

Performance Improvements

• bump wrappers (#46) (82dd4a4)
• update MultiQC version (#45) (2610adc)
• Update unicorn and env, and tweak resources and unit tests (#42) (b547900)

0.11.1 (2025-11-13)

Bug Fixes

• Update pixi env and bump wrapper ver (#39) (613c07d)

0.11.0 (2025-11-12)

Features

• add bowtie2 env module to support CPU-specific binaries (#33) (c4b443f)

Bug Fixes

• add missing samtools dep, and fix typo (#36) (08273b9)

Performance Improvements

• adjust resources, and bowtie2 exec options (#35) (ceb9daf)
• Reduce number of threads and bind to socket (#38) (1716446)

0.10.1 (2025-07-25)

Bug Fixes

• revert metadmg (#31) (e6059f5)

0.10.0 (2025-07-24)

Features

• Bump metadmg version (#30) (0767200)
• replace compressbam with unicorn (#27) (7e63ed1)

0.9.6 (2025-07-19)

Bug Fixes

• tweak metadmg_dfit resources (#25) (c80c65e)

0.9.5 (2025-07-18)

Bug Fixes

• resource typo (#23) (4e9e45f)

0.9.4 (2025-07-18)

Bug Fixes

• default test units (#18) (08f28d2)
• minimum runtime (#21) (a304812)
• saturated reads output (#20) (1339b7c)

0.9.3 (2025-06-30)

Bug Fixes

• bam_filer query sorting (#15) (a922244)
• use metadmg conda (#17) (ee748f4)

0.9.2 (2025-06-19)

Bug Fixes

• increase bam_filter resources and comment param (#13) (32a00fe)

0.9.1 (2025-06-19)

Bug Fixes

• validation URL and schema (#11) (f9a81d5)

0.9.0 (2025-06-17)

Features

• Add filtering of saturated reads (#7) (2294dc3)

Bug Fixes

• Code refactor, tweak resources, bump wrappers, and update pixi env. (#8) (bdff102)
• YAML schema (#9) (1e5adc3)

Performance Improvements

• remove slurm nice for mapping (#6) (f205f7d)
• shard sort query (#5) (7789abe)
• Tweak resources (#2) (25c0b8d)