openff-bespokefit/.github/workflows/CI.yaml at c6395ea2f11cd97198dc3382e14ed8984e6d3175 · openforcefield/openff-bespokefit · GitHub

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name: CI

on:
  push:
    branches:
      - "main"
  pull_request:
    branches:
      - "main"
  schedule:
    - cron: "0 0 * * *"

jobs:
  test:

    name: ${{ matrix.os }}, 🐍=${{ matrix.python-version }}, 👁️=${{ matrix.openeye }}, ∫=${{ matrix.integration }}
    runs-on: ${{ matrix.os }}

    strategy:
      fail-fast: false
      matrix:
        os: [ubuntu-latest]
        #os: [ubuntu-latest, macOS-latest]
        python-version: ["3.10"]
        openeye: [true]
        integration: [true]

    env:
      OE_LICENSE: ${{ github.workspace }}/oe_license.txt

    steps:
      - uses: actions/checkout@v3

      - name: Install with OpenEye Toolkits
        if: ${{ matrix.openeye == true }}
        uses: mamba-org/provision-with-micromamba@main
        with:
          environment-file: devtools/conda-envs/test-env.yaml
          channel-priority: "flexible"
          #extra-specs: |
          #  python=${{ matrix.python-version }}

      - name: Install with AmberTools
        if: ${{ matrix.openeye == false }}
        uses: mamba-org/provision-with-micromamba@main
        with:
          environment-file: devtools/conda-envs/no_openeye.yaml
          extra-specs: |
            python=${{ matrix.python-version }}

      - name: License OpenEye
        shell: bash -l {0}
        if: ${{ matrix.openeye == true }}
        run: |
          echo "${SECRET_OE_LICENSE}" > ${OE_LICENSE}
          python -c "from openeye import oechem; assert oechem.OEChemIsLicensed()"
        env:
          SECRET_OE_LICENSE: ${{ secrets.OE_LICENSE }}

      - name: Install Package
        shell: bash -l {0}
        run: |
          python setup.py develop --no-deps

      - name: Conda Environment Information
        shell: bash -l {0}
        run: |
          conda info
          conda list

      #- name: Run Tests
      #  shell: bash -l {0}
      #  run: |
      #    pytest -v --cov=openff --cov-config=setup.cfg openff/bespokefit/tests --cov-report=xml

      #- name: Codecov
      #  uses: codecov/codecov-action@v3.1.1
      #  with:
      #    file: ./coverage.xml
      #    fail_ci_if_error: false

      - name: Run Integration Tests
        if: ${{ matrix.integration == true }}
        shell: bash -l {0}
        run: |
          openff-bespoke executor run --smiles "CC"  --target-torsion         '[C:1]-[C:2]'  --workflow-file openff/bespokefit/data/test/miscellaneous/fast-psi4-workflow.yaml