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Add pandoc to the environment dependencies #7252

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Add pandoc to the environment dependencies

Add pandoc to the environment dependencies #7252

Triggered via pull request February 9, 2026 09:07
@akorgorakorgor
opened #3735
akorgor:add-pandoc-to-env
Status Success
Total duration 43m 12s
Artifacts 7

nestbuildmatrix.yml

on: pull_request
clang-format
23s
clang-format
shellcheck
22s
shellcheck
pre-commit-hooks
1m 23s
pre-commit-hooks
no-crlf
20s
no-crlf
cppcheck
12m 6s
cppcheck
copyright_headers
25s
copyright_headers
unused_names
18s
unused_names
forbidden_types
19s
forbidden_types
mypy
39s
mypy
pylint
51s
pylint
isort
18s
isort
black
35s
black
flake8
30s
flake8
rstcheck
31s
rstcheck
vale
34s
vale
pydocstyle
26s
pydocstyle
lychee_IGNORED
25s
lychee_IGNORED
Matrix: build_linux
Matrix: build_macos
sphinx-rtd
3m 53s
sphinx-rtd
sphinx-conda
0s
sphinx-conda
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1 error and 65 warnings
lychee_IGNORED
Process completed with exit code 2.
build_linux (ubuntu-22.04, gcc, optimize, warning)
Failed to save: "/usr/bin/tar" failed with error: The process '/usr/bin/tar' failed with exit code 2
build_linux (ubuntu-22.04, gcc, optimize, warning): models/eprop_readout_bsshslm_2020.cpp#L314
unused parameter ‘lag’ [-Wunused-parameter]
build_linux (ubuntu-22.04, gcc, optimize, warning): models/weight_optimizer.cpp#L174
unused parameter ‘cp’ [-Wunused-parameter]
build_linux (ubuntu-22.04, gcc, optimize, warning): models/weight_optimizer.cpp#L123
unused parameter ‘d’ [-Wunused-parameter]
build_linux (ubuntu-22.04, gcc, optimize, warning): models/weight_optimizer.cpp#L118
unused parameter ‘d’ [-Wunused-parameter]
build_linux (ubuntu-22.04, gcc, optimize, warning): nestkernel/connection_manager.cpp#L790
unused parameter ‘hyberslab_size’ [-Wunused-parameter]
build_linux (ubuntu-22.04, gcc, optimize, warning): nestkernel/connection_manager.cpp#L790
unused parameter ‘graph_specs’ [-Wunused-parameter]
build_linux (ubuntu-22.04, gcc, optimize, warning): sli/scanner.cc#L737
this statement may fall through [-Wimplicit-fallthrough=]
build_linux (ubuntu-22.04, gcc, optimize, warning): sli/scanner.cc#L709
this statement may fall through [-Wimplicit-fallthrough=]
build_linux (ubuntu-22.04, gcc, optimize, warning): sli/scanner.cc#L667
this statement may fall through [-Wimplicit-fallthrough=]
build_linux (ubuntu-22.04, gcc, optimize, warning): sli/scanner.cc#L637
this statement may fall through [-Wimplicit-fallthrough=]
build_linux (ubuntu-22.04, gcc, boost, optimize, warning)
Failed to save: "/usr/bin/tar" failed with error: The process '/usr/bin/tar' failed with exit code 2
build_linux (ubuntu-22.04, gcc, boost, optimize, warning): models/eprop_readout_bsshslm_2020.cpp#L314
unused parameter ‘lag’ [-Wunused-parameter]
build_linux (ubuntu-22.04, gcc, boost, optimize, warning): models/weight_optimizer.cpp#L174
unused parameter ‘cp’ [-Wunused-parameter]
build_linux (ubuntu-22.04, gcc, boost, optimize, warning): models/weight_optimizer.cpp#L123
unused parameter ‘d’ [-Wunused-parameter]
build_linux (ubuntu-22.04, gcc, boost, optimize, warning): models/weight_optimizer.cpp#L118
unused parameter ‘d’ [-Wunused-parameter]
build_linux (ubuntu-22.04, gcc, boost, optimize, warning): nestkernel/connection_manager.cpp#L790
unused parameter ‘hyberslab_size’ [-Wunused-parameter]
build_linux (ubuntu-22.04, gcc, boost, optimize, warning): nestkernel/connection_manager.cpp#L790
unused parameter ‘graph_specs’ [-Wunused-parameter]
build_linux (ubuntu-22.04, gcc, boost, optimize, warning): sli/scanner.cc#L737
this statement may fall through [-Wimplicit-fallthrough=]
build_linux (ubuntu-22.04, gcc, boost, optimize, warning): sli/scanner.cc#L709
this statement may fall through [-Wimplicit-fallthrough=]
build_linux (ubuntu-22.04, gcc, boost, optimize, warning): sli/scanner.cc#L667
this statement may fall through [-Wimplicit-fallthrough=]
build_linux (ubuntu-22.04, gcc, boost, optimize, warning): sli/scanner.cc#L637
this statement may fall through [-Wimplicit-fallthrough=]
build_macos (macos-latest, clang, openmp, mpi, python, gsl, ltdl, boost, hdf5, optimize, warning): models/weight_optimizer.h#L384
definition of implicit copy constructor for 'WeightOptimizerCommonPropertiesAdam' is deprecated because it has a user-declared copy assignment operator [-Wdeprecated-copy]
build_macos (macos-latest, clang, openmp, mpi, python, gsl, ltdl, boost, hdf5, optimize, warning): models/weight_optimizer.cpp#L174
unused parameter 'cp' [-Wunused-parameter]
build_macos (macos-latest, clang, openmp, mpi, python, gsl, ltdl, boost, hdf5, optimize, warning): models/weight_optimizer.h#L324
definition of implicit copy constructor for 'WeightOptimizerCommonPropertiesGradientDescent' is deprecated because it has a user-declared copy assignment operator [-Wdeprecated-copy]
build_macos (macos-latest, clang, openmp, mpi, python, gsl, ltdl, boost, hdf5, optimize, warning): models/weight_optimizer.cpp#L123
unused parameter 'd' [-Wunused-parameter]
build_macos (macos-latest, clang, openmp, mpi, python, gsl, ltdl, boost, hdf5, optimize, warning): models/weight_optimizer.cpp#L118
unused parameter 'd' [-Wunused-parameter]
build_macos (macos-latest, clang, openmp, mpi, python, gsl, ltdl, boost, hdf5, optimize, warning): models/iaf_bw_2001.h#L327
definition of implicit copy assignment operator for 'State_' is deprecated because it has a user-provided copy constructor [-Wdeprecated-copy-with-user-provided-copy]
build_macos (macos-latest, clang, openmp, mpi, python, gsl, ltdl, boost, hdf5, optimize, warning): models/iaf_bw_2001_exact.h#L316
definition of implicit copy assignment operator for 'State_' is deprecated because it has a user-provided copy constructor [-Wdeprecated-copy-with-user-provided-copy]
build_macos (macos-latest, clang, openmp, mpi, python, gsl, ltdl, boost, hdf5, optimize, warning): nestkernel/connection_creator_impl.h#L170
ISO C++ requires the name after '::~' to be found in the same scope as the name before '::~' [-Wdtor-name]
build_macos (macos-latest, clang, openmp, mpi, python, gsl, ltdl, boost, hdf5, optimize, warning): nestkernel/connection_creator_impl.h#L170
ISO C++ requires the name after '::~' to be found in the same scope as the name before '::~' [-Wdtor-name]
build_macos (macos-latest, clang, openmp, mpi, python, gsl, ltdl, boost, hdf5, optimize, warning): nestkernel/module_manager.cpp#L110
unused parameter 'd' [-Wunused-parameter]
build_linux (ubuntu-22.04, gcc, mpi, python, gsl, ltdl, boost, optimize, warning)
Failed to save: "/usr/bin/tar" failed with error: The process '/usr/bin/tar' failed with exit code 2
build_linux (ubuntu-22.04, gcc, mpi, python, gsl, ltdl, boost, optimize, warning)
cast between incompatible function types from ‘void (*)(const void*, void*, int, const MPI::Datatype&)’ to ‘void (*)(void*, void*, int*, ompi_datatype_t**)’ [-Wcast-function-type]
build_linux (ubuntu-22.04, gcc, mpi, python, gsl, ltdl, boost, optimize, warning)
cast between incompatible function types from ‘void (*)(void*, void*, int*, ompi_datatype_t**, void (*)(void*, void*, int*, ompi_datatype_t**))’ to ‘void (*)(void*, void*, int*, ompi_datatype_t**)’ [-Wcast-function-type]
build_linux (ubuntu-22.04, gcc, mpi, python, gsl, ltdl, boost, optimize, warning)
cast between incompatible function types from ‘void (*)(const void*, void*, int, const MPI::Datatype&)’ to ‘void (*)(void*, void*, int*, ompi_datatype_t**)’ [-Wcast-function-type]
build_linux (ubuntu-22.04, gcc, mpi, python, gsl, ltdl, boost, optimize, warning)
cast between incompatible function types from ‘void (*)(void*, void*, int*, ompi_datatype_t**, void (*)(void*, void*, int*, ompi_datatype_t**))’ to ‘void (*)(void*, void*, int*, ompi_datatype_t**)’ [-Wcast-function-type]
build_linux (ubuntu-22.04, gcc, mpi, python, gsl, ltdl, boost, optimize, warning)
cast between incompatible function types from ‘void (*)(const void*, void*, int, const MPI::Datatype&)’ to ‘void (*)(void*, void*, int*, ompi_datatype_t**)’ [-Wcast-function-type]
build_linux (ubuntu-22.04, gcc, mpi, python, gsl, ltdl, boost, optimize, warning)
cast between incompatible function types from ‘void (*)(void*, void*, int*, ompi_datatype_t**, void (*)(void*, void*, int*, ompi_datatype_t**))’ to ‘void (*)(void*, void*, int*, ompi_datatype_t**)’ [-Wcast-function-type]
build_linux (ubuntu-22.04, gcc, mpi, python, gsl, ltdl, boost, optimize, warning): sli/scanner.cc#L737
this statement may fall through [-Wimplicit-fallthrough=]
build_linux (ubuntu-22.04, gcc, mpi, python, gsl, ltdl, boost, optimize, warning): sli/scanner.cc#L709
this statement may fall through [-Wimplicit-fallthrough=]
build_linux (ubuntu-22.04, gcc, mpi, python, gsl, ltdl, boost, optimize, warning): sli/scanner.cc#L667
this statement may fall through [-Wimplicit-fallthrough=]
build_linux (ubuntu-22.04, gcc, mpi, python, gsl, ltdl, boost, optimize, warning): sli/scanner.cc#L637
this statement may fall through [-Wimplicit-fallthrough=]
build_linux (ubuntu-22.04, gcc, openmp, python, gsl, ltdl, boost, optimize, warning)
Failed to save: "/usr/bin/tar" failed with error: The process '/usr/bin/tar' failed with exit code 2
build_linux (ubuntu-22.04, gcc, openmp, python, gsl, ltdl, boost, optimize, warning): models/iaf_cond_alpha_mc.h#L510
comparison of unsigned expression in ‘>= 0’ is always true [-Wtype-limits]
build_linux (ubuntu-22.04, gcc, openmp, python, gsl, ltdl, boost, optimize, warning): models/iaf_cond_alpha_mc.h#L493
comparison of unsigned expression in ‘< 0’ is always false [-Wtype-limits]
build_linux (ubuntu-22.04, gcc, openmp, python, gsl, ltdl, boost, optimize, warning): models/iaf_bw_2001_exact.h#L541
implicitly-declared ‘constexpr nest::iaf_bw_2001_exact::State_& nest::iaf_bw_2001_exact::State_::operator=(const nest::iaf_bw_2001_exact::State_&)’ is deprecated [-Wdeprecated-copy]
build_linux (ubuntu-22.04, gcc, openmp, python, gsl, ltdl, boost, optimize, warning): nestkernel/connection_manager.cpp#L790
unused parameter ‘hyberslab_size’ [-Wunused-parameter]
build_linux (ubuntu-22.04, gcc, openmp, python, gsl, ltdl, boost, optimize, warning): nestkernel/connection_manager.cpp#L790
unused parameter ‘graph_specs’ [-Wunused-parameter]
build_linux (ubuntu-22.04, gcc, openmp, python, gsl, ltdl, boost, optimize, warning): nestkernel/module_manager.cpp#L110
unused parameter ‘d’ [-Wunused-parameter]
build_linux (ubuntu-22.04, gcc, openmp, python, gsl, ltdl, boost, optimize, warning): sli/scanner.cc#L737
this statement may fall through [-Wimplicit-fallthrough=]
build_linux (ubuntu-22.04, gcc, openmp, python, gsl, ltdl, boost, optimize, warning): sli/scanner.cc#L709
this statement may fall through [-Wimplicit-fallthrough=]
build_linux (ubuntu-22.04, gcc, openmp, python, gsl, ltdl, boost, optimize, warning): sli/scanner.cc#L667
this statement may fall through [-Wimplicit-fallthrough=]
build_linux (ubuntu-22.04, gcc, openmp, python, gsl, ltdl, boost, optimize, warning): sli/scanner.cc#L637
this statement may fall through [-Wimplicit-fallthrough=]
build_linux (ubuntu-22.04, gcc, openmp, mpi, python, gsl, ltdl, boost, hdf5, sionlib, libneurosim...
Failed to save: "/usr/bin/tar" failed with error: The process '/usr/bin/tar' failed with exit code 2
build_linux (ubuntu-22.04, gcc, openmp, mpi, python, gsl, ltdl, boost, hdf5, sionlib, libneurosim...
unused parameter ‘id’ [-Wunused-parameter]
build_linux (ubuntu-22.04, gcc, openmp, mpi, python, gsl, ltdl, boost, hdf5, sionlib, libneurosim...
unused parameter ‘t’ [-Wunused-parameter]
build_linux (ubuntu-22.04, gcc, openmp, mpi, python, gsl, ltdl, boost, hdf5, sionlib, libneurosim...
unused parameter ‘id’ [-Wunused-parameter]
build_linux (ubuntu-22.04, gcc, openmp, mpi, python, gsl, ltdl, boost, hdf5, sionlib, libneurosim...
unused parameter ‘t’ [-Wunused-parameter]
build_linux (ubuntu-22.04, gcc, openmp, mpi, python, gsl, ltdl, boost, hdf5, sionlib, libneurosim...
cast between incompatible function types from ‘void (*)(const void*, void*, int, const MPI::Datatype&)’ to ‘void (*)(void*, void*, int*, ompi_datatype_t**)’ [-Wcast-function-type]
build_linux (ubuntu-22.04, gcc, openmp, mpi, python, gsl, ltdl, boost, hdf5, sionlib, libneurosim...
cast between incompatible function types from ‘void (*)(void*, void*, int*, ompi_datatype_t**, void (*)(void*, void*, int*, ompi_datatype_t**))’ to ‘void (*)(void*, void*, int*, ompi_datatype_t**)’ [-Wcast-function-type]
build_linux (ubuntu-22.04, gcc, openmp, mpi, python, gsl, ltdl, boost, hdf5, sionlib, libneurosim...: sli/scanner.cc#L737
this statement may fall through [-Wimplicit-fallthrough=]
build_linux (ubuntu-22.04, gcc, openmp, mpi, python, gsl, ltdl, boost, hdf5, sionlib, libneurosim...: sli/scanner.cc#L709
this statement may fall through [-Wimplicit-fallthrough=]
build_linux (ubuntu-22.04, gcc, openmp, mpi, python, gsl, ltdl, boost, hdf5, sionlib, libneurosim...: sli/scanner.cc#L667
this statement may fall through [-Wimplicit-fallthrough=]
build_linux (ubuntu-22.04, gcc, openmp, mpi, python, gsl, ltdl, boost, hdf5, sionlib, libneurosim...: sli/scanner.cc#L637
this statement may fall through [-Wimplicit-fallthrough=]

Artifacts

Produced during runtime
Name Size Digest
-build-logs-macos-latest-clang Expired
129 KB
sha256:04949ed65a79b794171c36b3f99a09d620e160eebebb682fbea3b1d51a8d9ab5
build-logs-ubuntu-22.04-gcc-boost, optimize, warning Expired
42 KB
sha256:e7d9f71deea0ad943dd5f7ab60e96c49f6ee1671f500ca90c03ef56ffda9170e
build-logs-ubuntu-22.04-gcc-mpi, python, gsl, ltdl, boost, optimize, warning Expired
116 KB
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build-logs-ubuntu-22.04-gcc-openmp, mpi, python, gsl, ltdl, boost, hdf5, sionlib, libneurosim, optimize, warning, music, detailed-timers, threaded-timers, mpi-sync-timer Expired
118 KB
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build-logs-ubuntu-22.04-gcc-openmp, python, gsl, ltdl, boost, optimize, warning Expired
131 KB
sha256:28c7af862ba06f39d21cb900cec81add3584e52f3a8a6184fd9a0a024551b533
build-logs-ubuntu-22.04-gcc-optimize, warning Expired
41.3 KB
sha256:15ab082d753c54f1ab1d58949cc30445e6ecddbf66ada63aa6b672acde199133
sphinx-rtd output Expired
43.3 MB
sha256:cbb9147b9f16a9a26736bbd3f2c222de1e241e593841c8a0aa9fa85077232db0